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    xerD site-specific tyrosine recombinase XerD [ Parabacteroides distasonis ]

    Gene ID: 93523305, updated on 27-Aug-2024

    Summary

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    Gene symbol
    xerD
    Gene description
    site-specific tyrosine recombinase XerD
    Locus tag
    FQN59_RS09165
    Gene type
    protein coding
    Organism
    Parabacteroides distasonis (strain: APCS2/PD, nat-host: Homo sapiens)
    Lineage
    Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides
    Old locus tag
    FQN59_09400
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    Genomic context

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    NZ_CP042285.1Genomic Context describing neighboring genes Neighboring gene RagB/SusD family nutrient uptake outer membrane protein Neighboring gene Rpn family recombination-promoting nuclease/putative transposase Neighboring gene type II 3-dehydroquinate dehydratase Neighboring gene pyruvate kinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP042285.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Complete Genome Sequence of a Parabacteroides distasonis Strain (CavFT hAR46) Isolated from a Gut Wall-Cavitating Microlesion in a Patient with Severe Crohn's Disease. Yang F, et al. Microbiol Resour Announc, 2019 Sep 5. PMID 31488526, Free PMC Article
    2. Xer Site Specific Recombination: Double and Single Recombinase Systems. Castillo F, et al. Front Microbiol, 2017. PMID 28373867, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    site-specific tyrosine recombinase XerD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP042285.1 Reference assembly

      Range
      2243157..2244062 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_005859891.1 MULTISPECIES: site-specific tyrosine recombinase XerD [Parabacteroides]

      See identical proteins and their annotated locations for WP_005859891.1

      UniProtKB/TrEMBL
      A0A069S606, A0A174KGB5, A0A1Q6I3F2, A0A223HU05, A0A3L7ZIL5, A0A496C0D5, A0A496DKR4, A0A496DT82, A0AAD2TRX6, A0AAE5NFA7, A6LH41, C7X430, E1Z1K6, K6B6I8
    Nucleotide Protein
    Heading Accession and Version