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    golga2 golgin A2 [ Sparus aurata (gilthead seabream) ]

    Gene ID: 115592621, updated on 17-Mar-2024

    Summary

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    Gene symbol
    golga2
    Gene description
    golgin A2
    See related
    Ensembl:ENSSAUG00010008870
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sparus aurata
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Spariformes; Sparidae; Sparus
    Orthologs
    human zebrafish all
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    Genomic context

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    See golga2 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    100 current fSpaAur1.1 (GCF_900880675.1) 12 NC_044198.1 (17335298..17353746, complement)

    Chromosome 12 - NC_044198.1Genomic Context describing neighboring genes Neighboring gene cdkn1a interacting zinc finger protein 1a Neighboring gene dynamin 1a Neighboring gene heat shock protein 5 Neighboring gene Rab9 effector protein with kelch motifs

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_044198.1 Chromosome 12 Reference fSpaAur1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Golgi organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in Golgi cis cisterna IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in Golgi cisterna membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cis-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    golgin subfamily A member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sparus aurata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fSpaAur1.1 Primary Assembly

    Genomic

    1. NC_044198.1 Reference fSpaAur1.1 Primary Assembly

      Range
      17335298..17353746 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030435593.1 → XP_030291453.1  golgin subfamily A member 2 isoform X6

      UniProtKB/TrEMBL
      A0A671UZ65, A0A671V0U2
      Related
      ENSSAUP00010019772.1, ENSSAUT00010020918.1
      Conserved Domains (2) summary
      TIGR02168
      Location:120 → 457
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam15070
      Location:351 → 1030
      GOLGA2L5; Putative golgin subfamily A member 2-like protein 5

    2. XM_030435590.1 → XP_030291450.1  golgin subfamily A member 2 isoform X3

      UniProtKB/TrEMBL
      A0A671V0U2, A0A671V1G2
      Related
      ENSSAUP00010019746.1, ENSSAUT00010020889.1
      Conserved Domains (2) summary
      TIGR02168
      Location:171 → 508
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam15070
      Location:402 → 1081
      GOLGA2L5; Putative golgin subfamily A member 2-like protein 5

    3. XM_030435592.1 → XP_030291452.1  golgin subfamily A member 2 isoform X5

      UniProtKB/TrEMBL
      A0A671V0S8, A0A671V0U2
      Related
      ENSSAUP00010019763.1, ENSSAUT00010020906.1
      Conserved Domains (2) summary
      TIGR02168
      Location:145 → 482
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam15070
      Location:376 → 1055
      GOLGA2L5; Putative golgin subfamily A member 2-like protein 5

    4. XM_030435591.1 → XP_030291451.1  golgin subfamily A member 2 isoform X4

      UniProtKB/TrEMBL
      A0A671V0U2, A0A671V4F8
      Related
      ENSSAUP00010019755.1, ENSSAUT00010020898.1
      Conserved Domains (2) summary
      TIGR02169
      Location:209 → 546
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      pfam15070
      Location:400 → 1079
      GOLGA2L5; Putative golgin subfamily A member 2-like protein 5

    5. XM_030435589.1 → XP_030291449.1  golgin subfamily A member 2 isoform X2

      UniProtKB/TrEMBL
      A0A671V0U2
      Conserved Domains (2) summary
      TIGR02168
      Location:196 → 533
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam15070
      Location:427 → 1103
      GOLGA2L5; Putative golgin subfamily A member 2-like protein 5

    6. XM_030435588.1 → XP_030291448.1  golgin subfamily A member 2 isoform X1

      UniProtKB/TrEMBL
      A0A671V0P9, A0A671V0U2
      Related
      ENSSAUP00010019733.1, ENSSAUT00010020876.1
      Conserved Domains (2) summary
      TIGR02168
      Location:196 → 533
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam15070
      Location:427 → 1106
      GOLGA2L5; Putative golgin subfamily A member 2-like protein 5
    Nucleotide Protein
    Heading Accession and Version

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