U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    TNFRSF11B TNF receptor superfamily member 11b [ Gopherus evgoodei (Goodes thornscrub tortoise) ]

    Gene ID: 115645236, updated on 17-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    TNFRSF11B
    Gene description
    TNF receptor superfamily member 11b
    See related
    Ensembl:ENSGEVG00005014658
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gopherus evgoodei
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Gopherus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TNFRSF11B in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current rGopEvg1_v1.p (GCF_007399415.2) 2 NC_044323.1 (272463233..272492017, complement)

    Chromosome 2 - NC_044323.1Genomic Context describing neighboring genes Neighboring gene exostosin glycosyltransferase 1 Neighboring gene sterile alpha motif domain containing 12 Neighboring gene collectin subfamily member 10 Neighboring gene mal, T cell differentiation protein 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_044323.1 Chromosome 2 Reference rGopEvg1_v1.p Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    tumor necrosis factor receptor superfamily member 11B

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gopherus evgoodei Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rGopEvg1_v1.p Primary Assembly

    Genomic

    1. NC_044323.1 Reference rGopEvg1_v1.p Primary Assembly

      Range
      272463233..272492017 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030549609.1 → XP_030405469.1  tumor necrosis factor receptor superfamily member 11B isoform X1

      UniProtKB/TrEMBL
      A0A8C4Y626
      Conserved Domains (4) summary
      cd01670
      Location:232 → 273
      Death; Death Domain: a protein-protein interaction domain
      cd00185
      Location:124 → 185
      TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)
      cd10581
      Location:6 → 152
      TNFRSF11B; Tumor necrosis factor receptor superfamily member 11B (TNFRSF11B), also known as Osteoprotegerin (OPG)
      cl14633
      Location:307 → 365
      DD; Death Domain Superfamily of protein-protein interaction domains

    2. XM_030549610.1 → XP_030405470.1  tumor necrosis factor receptor superfamily member 11B isoform X2

      UniProtKB/TrEMBL
      A0A8C4Y626
      Related
      ENSGEVP00005020683.1, ENSGEVT00005021722.1
      Conserved Domains (4) summary
      cd01670
      Location:193 → 234
      Death; Death Domain: a protein-protein interaction domain
      cd00185
      Location:85 → 146
      TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)
      cl14633
      Location:268 → 326
      DD; Death Domain Superfamily of protein-protein interaction domains
      cl22855
      Location:1 → 113
      TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.