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    inpp-5K Inositol polyphosphate 5-phosphatase [ Caenorhabditis elegans ]

    Gene ID: 183643, updated on 9-Dec-2024

    Summary

    Official Symbol
    inpp-5K
    Official Full Name
    Inositol polyphosphate 5-phosphatase
    Primary source
    WormBase:WBGene00086546
    Locus tag
    CELE_C50C3.7
    See related
    AllianceGenome:WB:WBGene00086546
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Enables phosphatidylinositol phosphate phosphatase activity. Acts upstream of or within with a positive effect on flagellated sperm motility. Located in several cellular components, including dendrite; neuronal cell body; and non-motile cilium. Is expressed in PVDL and PVDR. Human ortholog(s) of this gene implicated in congenital muscular dystrophy with cataracts and intellectual disability. Orthologous to human INPP5J (inositol polyphosphate-5-phosphatase J) and INPP5K (inositol polyphosphate-5-phosphatase K). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See inpp-5K in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    6
    Sequence:
    Chromosome: III; NC_003281.10 (8159156..8161338, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene MSP domain-containing protein;Major sperm protein Neighboring gene Uncharacterized protein Neighboring gene Autophagy-related protein 13 homolog Neighboring gene BTB and MATH domain-containing protein 42 Neighboring gene Pre-mRNA-splicing factor 8 homolog Neighboring gene ncRNA

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables inositol-1,4,5-trisphosphate 5-phosphatase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables phosphatidylinositol phosphate phosphatase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in axon IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in dendrite IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in neuronal cell body IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in non-motile cilium IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    Inositol polyphosphate 5-phosphatase
    NP_498783.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      8159156..8161338 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_066382.6NP_498783.1  Inositol polyphosphate 5-phosphatase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_498783.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P34370
      Conserved Domains (1) summary
      smart00128
      Location:1284
      IPPc; Inositol polyphosphate phosphatase, catalytic domain homologues