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    LOC116380931 protocadherin gamma-C3-like [ Anarrhichthys ocellatus (wolf-eel) ]

    Gene ID: 116380931, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC116380931
    Gene description
    protocadherin gamma-C3-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anarrhichthys ocellatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Zoarcales; Anarhichadidae; Anarrhichthys
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

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    See LOC116380931 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current GSC_Weel_1.0 (GCF_004355925.1) Unplaced Scaffold NW_022289748.1 (7..1256)

    NW_022289748.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_022289748 Unplaced Scaffold Reference GSC_Weel_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protocadherin gamma-C3-like

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Anarrhichthys ocellatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GSC_Weel_1.0 Primary Assembly

    Genomic

    1. NW_022289748.1 Reference GSC_Weel_1.0 Primary Assembly

      Range
      7..1256
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031842742.1 → XP_031698602.1  protocadherin gamma-C3-like

      Conserved Domains (2) summary
      cd11304
      Location:146 → 247
      Cadherin_repeat; Cadherin tandem repeat domain
      pfam08266
      Location:39 → 121
      Cadherin_2; Cadherin-like
    Nucleotide Protein
    Heading Accession and Version

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