U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    ganab glucosidase, alpha; neutral AB [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100492576, updated on 4-Nov-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ganabprovided by Xenbase
    Official Full Name
    glucosidase, alpha; neutral ABprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-997256
    See related
    Ensembl:ENSXETG00000005580 AllianceGenome:Xenbase:XB-GENE-997256
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Summary
    Predicted to enable alpha-glucosidase activity and carbohydrate binding activity. Predicted to act upstream of or within carbohydrate metabolic process. Human ortholog(s) of this gene implicated in polycystic kidney disease; polycystic kidney disease 3; and polycystic liver disease. Orthologous to human GANAB (glucosidase II alpha subunit). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ganab in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (36923566..36956848, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (41622129..41654001, complement)

    Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene retinal outer segment membrane protein 1 Neighboring gene beta-1,3-glucuronyltransferase 3 Neighboring gene small nucleolar RNA SNORD31 Neighboring gene integrator complex subunit 5

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables alpha-glucosidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables carbohydrate binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity, acting on glycosyl bonds IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    neutral alpha-glucosidase AB

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      36923566..36956848 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002942977.5 → XP_002943023.3  neutral alpha-glucosidase AB isoform X2

      UniProtKB/TrEMBL
      A0A6I8R1G1, A0A8J0QZ98
      Related
      ENSXETP00000075822.2, ENSXETT00000073713.2
      Conserved Domains (2) summary
      cd06603
      Location:398 → 865
      GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
      cd14752
      Location:258 → 398
      GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

    2. XM_004919701.4 → XP_004919758.2  neutral alpha-glucosidase AB isoform X1

      UniProtKB/TrEMBL
      A0A6I8QIB2, A0A8J0R8J0
      Related
      ENSXETP00000072043.2, ENSXETT00000076410.2
      Conserved Domains (2) summary
      cd06603
      Location:420 → 887
      GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
      cd14752
      Location:280 → 420
      GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.