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    TFAM transcription factor A, mitochondrial [ Corvus moneduloides (New Caledonian crow) ]

    Gene ID: 116447715, updated on 3-Aug-2024

    Summary

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    Gene symbol
    TFAM
    Gene description
    transcription factor A, mitochondrial
    See related
    Ensembl:ENSCMUG00005007491
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Corvus moneduloides
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
    Orthologs
    human mouse all
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    Genomic context

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    See TFAM in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current bCorMon1.pri (GCF_009650955.1) 8 NC_045483.1 (37150105..37158592)

    Chromosome 8 - NC_045483.1Genomic Context describing neighboring genes Neighboring gene CDGSH iron sulfur domain 1 Neighboring gene ubiquitin conjugating enzyme E2 D1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045483.1 Chromosome 8 Reference bCorMon1.pri

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription cis-regulatory region binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor A, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Corvus moneduloides Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bCorMon1.pri

    Genomic

    1. NC_045483.1 Reference bCorMon1.pri

      Range
      37150105..37158592
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032117175.1 → XP_031973066.1  transcription factor A, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A8C3H200, A0A8U7N058
      Related
      ENSCMUP00005012493.1, ENSCMUT00005013421.1
      Conserved Domains (2) summary
      PTZ00121
      Location:125 → 293
      PTZ00121; MAEBL; Provisional
      cd01390
      Location:75 → 140
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...

    2. XM_032117176.1 → XP_031973067.1  transcription factor A, mitochondrial isoform X2

      UniProtKB/TrEMBL
      A0A8C3H2J2, A0A8U7MZV6
      Related
      ENSCMUP00005012502.1, ENSCMUT00005013430.1
      Conserved Domains (2) summary
      PTZ00121
      Location:118 → 274
      PTZ00121; MAEBL; Provisional
      cd01390
      Location:75 → 140
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...

    3. XM_032117177.1 → XP_031973068.1  transcription factor A, mitochondrial isoform X3

      Conserved Domains (2) summary
      PTZ00121
      Location:125 → 242
      PTZ00121; MAEBL; Provisional
      cd01390
      Location:75 → 140
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
    Nucleotide Protein
    Heading Accession and Version

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