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    ZRANB1 zinc finger RANBP2-type containing 1 [ Hylobates moloch (silvery gibbon) ]

    Gene ID: 116482272, updated on 18-Mar-2024

    Summary

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    Gene symbol
    ZRANB1
    Gene description
    zinc finger RANBP2-type containing 1
    See related
    EnsemblRapid:ENSHMOG00010004660
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Hylobates moloch
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Hylobates
    Orthologs
    human mouse all
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    Genomic context

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    See ZRANB1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2023_07 current HMol_V3 (GCF_009828535.3) Unplaced Scaffold NW_026652278.1 (8472777..8541890, complement)
    100 previous assembly HMol (GCF_009828535.1) Unplaced Scaffold NW_022454844.1 (8469870..8541882, complement)

    NW_026652278.1Genomic Context describing neighboring genes Neighboring gene small ribosomal subunit protein bS21m-like Neighboring gene C-terminal binding protein 2 Neighboring gene uncharacterized LOC131383015 Neighboring gene nucleophosmin-like Neighboring gene abraxas 2, BRISC complex subunit

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables K63-linked polyubiquitin modification-dependent protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein K29-linked deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein K33-linked deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein deubiquitination involved in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquitin thioesterase ZRANB1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009828535.3-RS_2023_07

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HMol_V3

    Genomic

    1. NW_026652278.1 Reference HMol_V3

      Range
      8472777..8541890 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032175603.2 → XP_032031494.1  ubiquitin thioesterase ZRANB1 isoform X2

      Related
      ENSHMOP00010005182.1, ENSHMOT00010006895.1
      Conserved Domains (4) summary
      smart00547
      Location:152 → 175
      ZnF_RBZ; Zinc finger domain
      sd00029
      Location:88 → 107
      zf-RanBP2; RanBP2-type Zn finger [structural motif]
      pfam02338
      Location:438 → 586
      OTU; OTU-like cysteine protease
      pfam18418
      Location:246 → 341
      AnkUBD; Ankyrin ubiquitin-binding domain

    2. XM_058435909.1 → XP_058291892.1  ubiquitin thioesterase ZRANB1 isoform X1

    Nucleotide Protein
    Heading Accession and Version

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