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    phf14 PHD finger protein 14 [ Xiphophorus hellerii (green swordtail) ]

    Gene ID: 116730834, updated on 18-Mar-2024

    Summary

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    Gene symbol
    phf14
    Gene description
    PHD finger protein 14
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xiphophorus hellerii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
    Orthologs
    human zebrafish all
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    Genomic context

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    See phf14 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    100 current Xiphophorus_hellerii-4.1 (GCF_003331165.1) 13 NC_045684.1 (26603594..26684181)

    Chromosome 13 - NC_045684.1Genomic Context describing neighboring genes Neighboring gene neurexophilin 1 Neighboring gene zinc finger BED domain-containing protein 1-like Neighboring gene glucocorticoid induced 1a Neighboring gene UBAP1-MVB12-associated (UMA) domain containing 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045684.1 Chromosome 13 Reference Xiphophorus_hellerii-4.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    PHD finger protein 14

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xiphophorus hellerii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xiphophorus_hellerii-4.1 Primary Assembly

    Genomic

    1. NC_045684.1 Reference Xiphophorus_hellerii-4.1 Primary Assembly

      Range
      26603594..26684181
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032580336.1 → XP_032436227.1  PHD finger protein 14 isoform X1

      Conserved Domains (5) summary
      COG5141
      Location:340 → 672
      COG5141; PHD zinc finger-containing protein [General function prediction only]
      cd15562
      Location:747 → 796
      PHD2_PHF14; PHD finger 2 found in PHD finger protein 14 (PHF14) and similar proteins
      cd15563
      Location:892 → 940
      PHD3_PHF14; PHD finger 3 found in PHD finger protein 14 (PHF14) and similar proteins
      cd15674
      Location:404 → 517
      ePHD_PHF14; Extended PHD finger found in PHD finger protein 14 (PHF14) and similar proteins
      NF033609
      Location:77 → 179
      MSCRAMM_ClfA; MSCRAMM family adhesin clumping factor ClfA

    2. XM_032580338.1 → XP_032436229.1  PHD finger protein 14 isoform X2

      Conserved Domains (4) summary
      COG5141
      Location:340 → 672
      COG5141; PHD zinc finger-containing protein [General function prediction only]
      cd15562
      Location:747 → 796
      PHD2_PHF14; PHD finger 2 found in PHD finger protein 14 (PHF14) and similar proteins
      cd15674
      Location:404 → 517
      ePHD_PHF14; Extended PHD finger found in PHD finger protein 14 (PHF14) and similar proteins
      NF033609
      Location:77 → 179
      MSCRAMM_ClfA; MSCRAMM family adhesin clumping factor ClfA
    Nucleotide Protein Strain
    Heading Accession and Version

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