U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    Axin1 axin 1 [ Rattus rattus (black rat) ]

    Gene ID: 116910556, updated on 18-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    Axin1
    Gene description
    axin 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus rattus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Axin1 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    100 current Rrattus_CSIRO_v1 (GCF_011064425.1) 9 NC_046162.1 (3400823..3455972)

    Chromosome 9 - NC_046162.1Genomic Context describing neighboring genes Neighboring gene post-GPI attachment to proteins 6 Neighboring gene mitochondrial ribosomal protein L28 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene protein disulfide isomerase family A member 2 Neighboring gene Rho GDP dissociation inhibitor gamma

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_046162.1 Chromosome 9 Reference Rrattus_CSIRO_v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in negative regulation of canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    axin-1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Rattus rattus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Rrattus_CSIRO_v1 Primary Assembly

    Genomic

    1. NC_046162.1 Reference Rrattus_CSIRO_v1 Primary Assembly

      Range
      3400823..3455972
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032914467.1 → XP_032770358.1  axin-1 isoform X3

      Conserved Domains (4) summary
      cd08707
      Location:94 → 214
      RGS_Axin; Regulator of G protein signaling (RGS) domain found in the Axin protein
      cd11582
      Location:16 → 85
      Axin_TNKS_binding; Tankyrase binding N-terminal segment of axin
      pfam00778
      Location:788 → 865
      DIX; DIX domain
      pfam08833
      Location:469 → 500
      Axin_b-cat_bind; Axin beta-catenin binding domain

    2. XM_032914465.1 → XP_032770356.1  axin-1 isoform X1

      Conserved Domains (4) summary
      cd08707
      Location:136 → 256
      RGS_Axin; Regulator of G protein signaling (RGS) domain found in the Axin protein
      cd11582
      Location:58 → 127
      Axin_TNKS_binding; Tankyrase binding N-terminal segment of axin
      pfam00778
      Location:830 → 907
      DIX; DIX domain
      pfam08833
      Location:511 → 542
      Axin_b-cat_bind; Axin beta-catenin binding domain

    3. XM_032914466.1 → XP_032770357.1  axin-1 isoform X2

      Conserved Domains (4) summary
      cd08707
      Location:136 → 256
      RGS_Axin; Regulator of G protein signaling (RGS) domain found in the Axin protein
      cd11582
      Location:58 → 127
      Axin_TNKS_binding; Tankyrase binding N-terminal segment of axin
      pfam00778
      Location:794 → 871
      DIX; DIX domain
      pfam08833
      Location:511 → 542
      Axin_b-cat_bind; Axin beta-catenin binding domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.