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    HLTF helicase like transcription factor [ Trachypithecus francoisi (Francois's langur) ]

    Gene ID: 117084052, updated on 19-Mar-2024

    Summary

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    Gene symbol
    HLTF
    Gene description
    helicase like transcription factor
    See related
    EnsemblRapid:ENSTFRG00000001715
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Trachypithecus francoisi
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Trachypithecus
    Orthologs
    human mouse all
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    Genomic context

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    See HLTF in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    100 current Tfra_2.0 (GCF_009764315.1) Unplaced Scaffold NW_022681453.1 (144798121..144852845)

    NW_022681453.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117084051 Neighboring gene non-histone chromosomal protein HMG-17-like Neighboring gene HPS3 biogenesis of lysosomal organelles complex 2 subunit 1 Neighboring gene glycogenin 1 Neighboring gene carboxypeptidase A3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_022681453 Unplaced Scaffold Reference Tfra_2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP-dependent chromatin remodeler activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    helicase-like transcription factor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Trachypithecus francoisi Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Tfra_2.0 Primary Assembly

    Genomic

    1. NW_022681453.1 Reference Tfra_2.0 Primary Assembly

      Range
      144798121..144852845
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_033212361.1 → XP_033068252.1  helicase-like transcription factor isoform X1

      Conserved Domains (5) summary
      COG0553
      Location:471 → 1012
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd16509
      Location:761 → 804
      RING-HC_HLTF; RING finger, HC subclass, found in helicase-like transcription factor (HLTF) and similar proteins
      cd18071
      Location:240 → 643
      DEXHc_HLTF1_SMARC3; DEXH-box helicase domain of HLTF1
      pfam08797
      Location:60 → 153
      HIRAN; HIRAN domain
      cl28899
      Location:283 → 356
      DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

    2. XM_033212362.1 → XP_033068253.1  helicase-like transcription factor isoform X1

      Conserved Domains (5) summary
      COG0553
      Location:471 → 1012
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd16509
      Location:761 → 804
      RING-HC_HLTF; RING finger, HC subclass, found in helicase-like transcription factor (HLTF) and similar proteins
      cd18071
      Location:240 → 643
      DEXHc_HLTF1_SMARC3; DEXH-box helicase domain of HLTF1
      pfam08797
      Location:60 → 153
      HIRAN; HIRAN domain
      cl28899
      Location:283 → 356
      DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

    3. XM_033212364.1 → XP_033068255.1  helicase-like transcription factor isoform X3

      Related
      ENSTFRP00000002009.1, ENSTFRT00000002515.1
      Conserved Domains (5) summary
      COG0553
      Location:471 → 1008
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd16509
      Location:757 → 800
      RING-HC_HLTF; RING finger, HC subclass, found in helicase-like transcription factor (HLTF) and similar proteins
      cd18071
      Location:240 → 643
      DEXHc_HLTF1_SMARC3; DEXH-box helicase domain of HLTF1
      pfam08797
      Location:60 → 153
      HIRAN; HIRAN domain
      cl28899
      Location:283 → 356
      DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

    4. XM_033212365.1 → XP_033068256.1  helicase-like transcription factor isoform X3

      Conserved Domains (5) summary
      COG0553
      Location:471 → 1008
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd16509
      Location:757 → 800
      RING-HC_HLTF; RING finger, HC subclass, found in helicase-like transcription factor (HLTF) and similar proteins
      cd18071
      Location:240 → 643
      DEXHc_HLTF1_SMARC3; DEXH-box helicase domain of HLTF1
      pfam08797
      Location:60 → 153
      HIRAN; HIRAN domain
      cl28899
      Location:283 → 356
      DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

    5. XM_033212363.1 → XP_033068254.1  helicase-like transcription factor isoform X2

      Conserved Domains (5) summary
      COG0553
      Location:470 → 1011
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd16509
      Location:760 → 803
      RING-HC_HLTF; RING finger, HC subclass, found in helicase-like transcription factor (HLTF) and similar proteins
      cd18071
      Location:240 → 642
      DEXHc_HLTF1_SMARC3; DEXH-box helicase domain of HLTF1
      pfam08797
      Location:60 → 153
      HIRAN; HIRAN domain
      cl28899
      Location:283 → 356
      DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

    6. XM_033212366.1 → XP_033068257.1  helicase-like transcription factor isoform X4

      Conserved Domains (5) summary
      COG0553
      Location:470 → 1007
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd16509
      Location:756 → 799
      RING-HC_HLTF; RING finger, HC subclass, found in helicase-like transcription factor (HLTF) and similar proteins
      cd18071
      Location:240 → 642
      DEXHc_HLTF1_SMARC3; DEXH-box helicase domain of HLTF1
      pfam08797
      Location:60 → 153
      HIRAN; HIRAN domain
      cl28899
      Location:283 → 356
      DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

    7. XM_033212367.1 → XP_033068258.1  helicase-like transcription factor isoform X5

      Conserved Domains (4) summary
      COG0553
      Location:441 → 982
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd16509
      Location:731 → 774
      RING-HC_HLTF; RING finger, HC subclass, found in helicase-like transcription factor (HLTF) and similar proteins
      cd18071
      Location:240 → 613
      DEXHc_HLTF1_SMARC3; DEXH-box helicase domain of HLTF1
      pfam08797
      Location:60 → 153
      HIRAN; HIRAN domain
    Nucleotide Protein
    Heading Accession and Version

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