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    SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 [ Zootoca vivipara (common lizard) ]

    Gene ID: 118088632, updated on 20-Mar-2024

    Summary

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    Gene symbol
    SH3GLB1
    Gene description
    SH3 domain containing GRB2 like, endophilin B1
    See related
    EnsemblRapid:ENSZVIG00000009159
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Zootoca vivipara
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Zootoca
    Orthologs
    human mouse all
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    Genomic context

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    See SH3GLB1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2023_10 current rZooViv1.1 (GCF_963506605.1) 7 NC_083282.1 (26058304..26079639, complement)
    100 previous assembly UG_Zviv_1 (GCF_011800845.1) Linkage Group LG7 NC_048611.1 (68928803..68951061)

    Chromosome 7 - NC_083282.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132592429 Neighboring gene heparan sulfate 2-O-sulfotransferase 1 Neighboring gene selenoprotein F Neighboring gene calcium-activated chloride channel regulator 1-like Neighboring gene calcium-activated chloride channel regulator 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in membrane organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    endophilin-B1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_963506605.1-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rZooViv1.1

    Genomic

    1. NC_083282.1 Reference rZooViv1.1

      Range
      26058304..26079639 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035122502.2 → XP_034978393.1  endophilin-B1 isoform X2

      Conserved Domains (2) summary
      cd11945
      Location:338 → 398
      SH3_Endophilin_B1; Src homology 3 domain of Endophilin-B1
      cl12013
      Location:24 → 281
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

    2. XM_035122500.2 → XP_034978391.1  endophilin-B1 isoform X1

      Related
      ENSZVIP00000012311.1
      Conserved Domains (2) summary
      cd07616
      Location:24 → 252
      BAR_Endophilin_B1; The Bin/Amphiphysin/Rvs (BAR) domain of Endophilin-B1
      cd11945
      Location:309 → 369
      SH3_Endophilin_B1; Src homology 3 domain of Endophilin-B1
    Nucleotide Protein
    Heading Accession and Version

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