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    wasf1 WASP family member 1 [ Hippoglossus stenolepis (Pacific halibut) ]

    Gene ID: 118099472, updated on 8-May-2024

    Summary

    Gene symbol
    wasf1
    Gene description
    WASP family member 1
    Locus tag
    HST_G00197700
    See related
    EnsemblRapid:ENSHSTG00010019634
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Hippoglossus stenolepis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
    Orthologs
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    Genomic context

    See wasf1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    101 current HSTE1.2 (GCF_022539355.2) 20 NC_061502.1 (12688256..12738400, complement)
    100 previous assembly IPHC_HiSten_1.0 (GCF_013339905.1) 20 NC_048946.1 (12757878..12808071, complement)

    Chromosome 20 - NC_061502.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 167 Neighboring gene kinesin family member 25 Neighboring gene cell division cycle 40 homolog (S. cerevisiae) Neighboring gene methyltransferase like 24 Neighboring gene E3 ubiquitin/ISG15 ligase TRIM25-like

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables Arp2/3 complex binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables protein kinase A regulatory subunit binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in actin cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in positive regulation of Arp2/3 complex-mediated actin nucleation IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of SCAR complex IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    wiskott-Aldrich syndrome protein family member 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Hippoglossus stenolepis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HSTE1.2 Primary Assembly

    Genomic

    1. NC_061502.1 Reference HSTE1.2 Primary Assembly

      Range
      12688256..12738400 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035144120.2XP_035000011.1  wiskott-Aldrich syndrome protein family member 1 isoform X3

      Conserved Domains (2) summary
      cd21762
      Location:473476
      WH2; actin-binding sequence [structural motif]
      cl41728
      Location:447521
      WH2; Wiskott-Aldrich Syndrome Homology (WASP) region 2 (WH2 motif), and similar proteins
    2. XM_035144117.2XP_035000008.1  wiskott-Aldrich syndrome protein family member 1 isoform X1

      Related
      ENSHSTP00010051978.1, ENSHSTT00010055275.1
      Conserved Domains (2) summary
      cd21762
      Location:532535
      WH2; actin-binding sequence [structural motif]
      cl41728
      Location:506580
      WH2; Wiskott-Aldrich Syndrome Homology (WASP) region 2 (WH2 motif), and similar proteins
    3. XM_035144119.2XP_035000010.1  wiskott-Aldrich syndrome protein family member 1 isoform X2

      Related
      ENSHSTP00010051975.1, ENSHSTT00010055272.1
      Conserved Domains (2) summary
      cd21762
      Location:504507
      WH2; actin-binding sequence [structural motif]
      cl41728
      Location:478552
      WH2; Wiskott-Aldrich Syndrome Homology (WASP) region 2 (WH2 motif), and similar proteins
    4. XM_035144118.2XP_035000009.1  wiskott-Aldrich syndrome protein family member 1 isoform X1

      Conserved Domains (2) summary
      cd21762
      Location:532535
      WH2; actin-binding sequence [structural motif]
      cl41728
      Location:506580
      WH2; Wiskott-Aldrich Syndrome Homology (WASP) region 2 (WH2 motif), and similar proteins