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    ompR two-component system response regulator OmpR [ Metapseudomonas otitidis ]

    Gene ID: 57400580, updated on 24-Oct-2024

    Summary

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    Gene symbol
    ompR
    Gene description
    two-component system response regulator OmpR
    Locus tag
    PotMrB4_RS26860
    Gene type
    protein coding
    Organism
    Metapseudomonas otitidis (strain: MrB4)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Metapseudomonas
    Old locus tag
    PtoMrB4_53530
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    Genomic context

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    NZ_AP022642.1Genomic Context describing neighboring genes Neighboring gene PaaI family thioesterase Neighboring gene Tex family protein Neighboring gene ATP-binding protein Neighboring gene EAL domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_AP022642.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Role of OmpR in the Expression of Genes of the KdgR Regulon Involved in the Uptake and Depolymerization of Oligogalacturonides in Yersinia enterocolitica. Nieckarz M, et al. Front Cell Infect Microbiol, 2017. PMID 28861396, Free PMC Article
    2. Phenotypic and transcriptional analysis of the osmotic regulator OmpR in Yersinia pestis. Gao H, et al. BMC Microbiol, 2011 Feb 23. PMID 21345178, Free PMC Article
    3. Gene activation by the Escherichia coli positive regulator, OmpR. Phosphorylation-independent mechanism of activation by an OmpR mutant. Tsuzuki M, et al. J Mol Biol, 1994 Oct 7. PMID 7932717
    4. Purification and characterization of the OmpR protein, a positive regulator involved in osmoregulatory expression of the ompF and ompC genes in Escherichia coli. Jo YL, et al. J Biol Chem, 1986 Nov 15. PMID 3533941
    5. The response regulator OmpR oligomerizes via beta-sheets to form head-to-head dimers. Maris AE, et al. J Mol Biol, 2005 Jul 29. PMID 15979641

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    two-component system response regulator OmpR

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_AP022642.1 Reference assembly

      Range
      5804148..5804879
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_044405307.1 MULTISPECIES: two-component system response regulator OmpR [Pseudomonadaceae]

      See identical proteins and their annotated locations for WP_044405307.1

      UniProtKB/TrEMBL
      A0A0D6STH8, A0A1I0UN10
      Conserved Domains (1) summary
      PRK09468
      Location:6 → 243
      ompR; osmolarity response regulator; Provisional
    Nucleotide Protein
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