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    LOC118409651 ras GTPase-activating protein 1-like [ Branchiostoma floridae (Florida lancelet) ]

    Gene ID: 118409651, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC118409651
    Gene description
    ras GTPase-activating protein 1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Branchiostoma floridae
    Lineage
    Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes; Branchiostomatidae; Branchiostoma
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    Genomic context

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    See LOC118409651 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    100 current Bfl_VNyyK (GCF_000003815.2) 2 NC_049980.1 (31221938..31255383)

    Chromosome 2 - NC_049980.1Genomic Context describing neighboring genes Neighboring gene G-protein coupled receptor 54-like Neighboring gene putative polypeptide N-acetylgalactosaminyltransferase 9 Neighboring gene A-kinase anchor protein 13-like Neighboring gene germinal-center associated nuclear protein-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_049980.1 Chromosome 2 Reference Bfl_VNyyK Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Conserved Noncoding Elements in the Most Distant Genera of Cephalochordates: The Goldilocks Principle. Yue JX, et al. Genome Biol Evol, 2016 Aug 25. PMID 27412606, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras GTPase-activating protein 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Branchiostoma floridae Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Bfl_VNyyK Primary Assembly

    Genomic

    1. NC_049980.1 Reference Bfl_VNyyK Primary Assembly

      Range
      31221938..31255383
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035810819.1 → XP_035666712.1  ras GTPase-activating protein 1-like isoform X1

      UniProtKB/TrEMBL
      A0A9J7KMI0, C3ZGU2
      Conserved Domains (5) summary
      cd11788
      Location:150 → 208
      SH3_RasGAP; Src Homology 3 domain of Ras GTPase-Activating Protein 1
      cd13260
      Location:344 → 445
      PH_RASA1; RAS p21 protein activator (GTPase activating protein) 1 Pleckstrin homology (PH) domain
      cl02569
      Location:606 → 927
      RasGAP; Ras GTPase Activating Domain
      cl14603
      Location:461 → 607
      C2; C2 domain
      cl15255
      Location:31 → 133
      SH2; Src homology 2 (SH2) domain

    2. XM_035810820.1 → XP_035666713.1  ras GTPase-activating protein 1-like isoform X2

      UniProtKB/TrEMBL
      A0A9J7KMJ3, C3ZGU2
      Conserved Domains (5) summary
      cd11788
      Location:150 → 208
      SH3_RasGAP; Src Homology 3 domain of Ras GTPase-Activating Protein 1
      cd13260
      Location:344 → 445
      PH_RASA1; RAS p21 protein activator (GTPase activating protein) 1 Pleckstrin homology (PH) domain
      cl02569
      Location:606 → 927
      RasGAP; Ras GTPase Activating Domain
      cl14603
      Location:461 → 607
      C2; C2 domain
      cl15255
      Location:31 → 133
      SH2; Src homology 2 (SH2) domain

    3. XM_035810821.1 → XP_035666714.1  ras GTPase-activating protein 1-like isoform X3

      UniProtKB/TrEMBL
      A0A9J7KMH4, C3ZGU2
      Conserved Domains (5) summary
      cd08400
      Location:461 → 585
      C2_Ras_p21A1; C2 domain present in RAS p21 protein activator 1 (RasA1)
      cd11788
      Location:150 → 208
      SH3_RasGAP; Src Homology 3 domain of Ras GTPase-Activating Protein 1
      cd13260
      Location:344 → 445
      PH_RASA1; RAS p21 protein activator (GTPase activating protein) 1 Pleckstrin homology (PH) domain
      cl02569
      Location:584 → 905
      RasGAP; Ras GTPase Activating Domain
      cl15255
      Location:31 → 133
      SH2; Src homology 2 (SH2) domain
    Nucleotide Protein Strain
    Heading Accession and Version

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