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    GVI51_I06501 TATA-binding protein [ Nakaseomyces glabratus ]

    Gene ID: 2889082, updated on 6-Dec-2024

    Summary

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    Gene symbol
    GVI51_I06501
    Gene description
    TATA-binding protein
    Locus tag
    GVI51_I06501
    See related
    FungiDB:GVI51_I06501; VEuPathDB:GVI51_I06501
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Nakaseomyces glabratus (strain: ATCC 2001, nat-host: Homo sapiens, culture-collection: ATCC:2001, type-material: type material of Cryptococcus glabratus)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces
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    Genomic context

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    See GVI51_I06501 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_088959.1 (649692..650393, complement)

    Chromosome I - NC_088959.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene cohesin-loading factor complex subunit SCC4 Neighboring gene RNA-binding protein LSM5 Neighboring gene high-affinity iron permease FTR1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_088959.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo genome assembly of Candida glabrata reveals cell wall protein complement and structure of dispersed tandem repeat arrays. Xu Z, et al. Mol Microbiol, 2020 Jun. PMID 32068314
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • CAGL0I06688g
      Ortholog(s) have DNA binding, bending, RNA polymerase I transcription factor binding and RNA polymerase II activating transcription factor binding, more

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II general transcription initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription initiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    TATA-binding protein
    XP_447540.1
    • CAGL0I06688g
      Ortholog(s) have DNA binding, bending, RNA polymerase I transcription factor binding and RNA polymerase II activating transcription factor binding, more

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_088959.1 Reference assembly

      Range
      649692..650393 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_447540.1 → XP_447540.1  TATA-binding protein [Nakaseomyces glabratus]

      See identical proteins and their annotated locations for XP_447540.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0W0DMR9, Q6FQF4
      Conserved Domains (1) summary
      PLN00062
      Location:57 → 232
      PLN00062; TATA-box-binding protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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