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    Nr6a1 nuclear receptor subfamily 6 group A member 1 [ Onychomys torridus (southern grasshopper mouse) ]

    Gene ID: 118582432, updated on 20-Mar-2024

    Summary

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    Gene symbol
    Nr6a1
    Gene description
    nuclear receptor subfamily 6 group A member 1
    See related
    EnsemblRapid:ENSOTOG00005019931
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Onychomys torridus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Onychomys
    Orthologs
    human mouse all
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    Genomic context

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    See Nr6a1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    100 current mOncTor1.1 (GCF_903995425.1) 4 NC_050446.1 (368799..558286)

    Chromosome 4 - NC_050446.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L35 Neighboring gene WD repeat domain 38 Neighboring gene olfactomedin like 2A Neighboring gene 40S ribosomal protein S26-like Neighboring gene 60S ribosomal protein L36-like Neighboring gene nuclear receptor subfamily 5 group A member 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_050446.1 Chromosome 4 Reference mOncTor1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear receptor subfamily 6 group A member 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Onychomys torridus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mOncTor1.1

    Genomic

    1. NC_050446.1 Reference mOncTor1.1

      Range
      368799..558286
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036185297.1 → XP_036041190.1  nuclear receptor subfamily 6 group A member 1 isoform X1

      Related
      ENSOTOP00005026828.1, ENSOTOT00005029879.1
      Conserved Domains (2) summary
      cd06953
      Location:271 → 482
      NR_LBD_DHR4_like; The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4
      cd07169
      Location:67 → 156
      NR_DBD_GCNF_like; DNA-binding domain of Germ cell nuclear factor (GCNF) F1 is composed of two C4-type zinc fingers

    2. XM_036185298.1 → XP_036041191.1  nuclear receptor subfamily 6 group A member 1 isoform X2

      Conserved Domains (2) summary
      cd06953
      Location:270 → 481
      NR_LBD_DHR4_like; The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4
      cd07169
      Location:67 → 156
      NR_DBD_GCNF_like; DNA-binding domain of Germ cell nuclear factor (GCNF) F1 is composed of two C4-type zinc fingers

    3. XM_036185299.1 → XP_036041192.1  nuclear receptor subfamily 6 group A member 1 isoform X3

      Related
      ENSOTOP00005026822.1, ENSOTOT00005029873.1
      Conserved Domains (2) summary
      cd06953
      Location:257 → 468
      NR_LBD_DHR4_like; The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4
      cd07169
      Location:53 → 142
      NR_DBD_GCNF_like; DNA-binding domain of Germ cell nuclear factor (GCNF) F1 is composed of two C4-type zinc fingers
    Nucleotide Protein
    Heading Accession and Version

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