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    NR6A1 nuclear receptor subfamily 6 group A member 1 [ Rousettus aegyptiacus (Egyptian rousette) ]

    Gene ID: 107506646, updated on 30-Mar-2024

    Summary

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    Gene symbol
    NR6A1
    Gene description
    nuclear receptor subfamily 6 group A member 1
    Locus tag
    HJG63_014360
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rousettus aegyptiacus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Rousettinae; Rousettus
    Orthologs
    human mouse all
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    Genomic context

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    See NR6A1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    101 current mRouAeg1.p (GCF_014176215.1) Unplaced Scaffold NW_023416306.1 (8478429..8662366)
    100 previous assembly Raegyp2.0 (GCF_001466805.2) Unplaced Scaffold NW_015493366.1 (1213008..1396327)

    NW_023416306.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene olfactomedin like 2A Neighboring gene 5S ribosomal RNA Neighboring gene nuclear receptor subfamily 5 group A member 1 Neighboring gene adhesion G protein-coupled receptor D2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear receptor subfamily 6 group A member 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rousettus aegyptiacus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mRouAeg1.p

    Genomic

    1. NW_023416306.1 Reference mRouAeg1.p

      Range
      8478429..8662366
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016137417.2 → XP_015992903.1  nuclear receptor subfamily 6 group A member 1 isoform X1

      UniProtKB/TrEMBL
      A0A7J8INT2, A0A7J8IQ06
      Conserved Domains (2) summary
      cd06953
      Location:256 → 467
      NR_LBD_DHR4_like; The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4
      cd07169
      Location:52 → 141
      NR_DBD_GCNF_like; DNA-binding domain of Germ cell nuclear factor (GCNF) F1 is composed of two C4-type zinc fingers

    2. XM_016137418.2 → XP_015992904.1  nuclear receptor subfamily 6 group A member 1 isoform X2

      UniProtKB/TrEMBL
      A0A7J8INK2, A0A7J8IPH0
      Conserved Domains (2) summary
      cd06953
      Location:255 → 466
      NR_LBD_DHR4_like; The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4
      cd07169
      Location:52 → 141
      NR_DBD_GCNF_like; DNA-binding domain of Germ cell nuclear factor (GCNF) F1 is composed of two C4-type zinc fingers

    3. XM_036218400.1 → XP_036074293.1  nuclear receptor subfamily 6 group A member 1 isoform X4

      Conserved Domains (2) summary
      cd07169
      Location:52 → 141
      NR_DBD_GCNF_like; DNA-binding domain of Germ cell nuclear factor (GCNF) F1 is composed of two C4-type zinc fingers
      cl11397
      Location:256 → 359
      NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators

    4. XM_036218399.1 → XP_036074292.1  nuclear receptor subfamily 6 group A member 1 isoform X3

      UniProtKB/TrEMBL
      A0A7J8INT2, A0A7J8IQ54
      Conserved Domains (2) summary
      cd06953
      Location:214 → 425
      NR_LBD_DHR4_like; The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4
      cd07169
      Location:10 → 99
      NR_DBD_GCNF_like; DNA-binding domain of Germ cell nuclear factor (GCNF) F1 is composed of two C4-type zinc fingers
    Nucleotide Protein
    Heading Accession and Version

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