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    RASSF5 Ras association domain family member 5 [ Myotis myotis ]

    Gene ID: 118672789, updated on 30-Mar-2024

    Summary

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    Gene symbol
    RASSF5
    Gene description
    Ras association domain family member 5
    Locus tag
    mMyoMyo1_016327
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Myotis myotis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
    Orthologs
    human mouse all
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    Genomic context

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    See RASSF5 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current mMyoMyo1.p (GCF_014108235.1) Unplaced Scaffold NW_023416322.1 (9648535..9725194)

    NW_023416322.1Genomic Context describing neighboring genes Neighboring gene SLIT-ROBO Rho GTPase activating protein 2 Neighboring gene inhibitor of nuclear factor kappa B kinase subunit epsilon Neighboring gene eukaryotic translation initiation factor 2D Neighboring gene dual specificity tyrosine phosphorylation regulated kinase 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_023416322 Unplaced Scaffold Reference mMyoMyo1.p Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras association domain-containing protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Myotis myotis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mMyoMyo1.p Primary Assembly

    Genomic

    1. NW_023416322.1 Reference mMyoMyo1.p Primary Assembly

      Range
      9648535..9725194
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036342624.1 → XP_036198517.1  ras association domain-containing protein 5 isoform X2

      Conserved Domains (2) summary
      cd20886
      Location:125 → 176
      C1_RASSF5; protein kinase C conserved region 1 (C1 domain) found in Ras association domain-containing protein 5 (RASSF5) and similar proteins
      cl28922
      Location:213 → 336
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

    2. XM_036342623.1 → XP_036198516.1  ras association domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      A0A7J7STE6
      Conserved Domains (3) summary
      cd17220
      Location:213 → 368
      RA_RASSF5; Ras-associating (RA) domain of Ras-association domain family 5 (RASSF5)
      pfam16517
      Location:378 → 416
      Nore1-SARAH; Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain
      cd20886
      Location:125 → 176
      C1_RASSF5; protein kinase C conserved region 1 (C1 domain) found in Ras association domain-containing protein 5 (RASSF5) and similar proteins

    3. XM_036342625.1 → XP_036198518.1  ras association domain-containing protein 5 isoform X3

      UniProtKB/TrEMBL
      A0A7J7ST06
      Conserved Domains (2) summary
      cd17220
      Location:54 → 209
      RA_RASSF5; Ras-associating (RA) domain of Ras-association domain family 5 (RASSF5)
      pfam16517
      Location:219 → 257
      Nore1-SARAH; Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain
    Nucleotide Protein
    Heading Accession and Version

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