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    smn1 SMN complex subunit Smn1/Gem1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2542002, updated on 18-Sep-2024

    Summary

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    Official Symbol
    smn1
    Official Full Name
    SMN complex subunit Smn1/Gem1
    Primary source
    PomBase:SPAC2G11.08c
    Locus tag
    SPOM_SPAC2G11.08C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    yab8
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    Genomic context

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    See smn1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    2
    Sequence:
    Chromosome: I; NC_003424.3 (822092..822954, complement)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene AAA family ATPase Vps4 Neighboring gene ncRNA Neighboring gene protein phosphatase PP2C catalytic subunit Ptc3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Ca(2+) transporter Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Specific splicing defects in S. pombe carrying a degron allele of the Survival of Motor Neuron gene. Campion Y, et al. EMBO J, 2010 Jun 2. PMID 20400941, Free PMC Article
    2. The survival motor neuron protein of Schizosacharomyces pombe. Conservation of survival motor neuron interaction domains in divergent organisms. Paushkin S, et al. J Biol Chem, 2000 Aug 4. PMID 10816558
    3. Characterization of the Schizosaccharomyces pombe orthologue of the human survival motor neuron (SMN) protein. Owen N, et al. Hum Mol Genet, 2000 Mar 22. PMID 10749974
    4. The Schizosaccharomyces pombe protein Yab8p and a novel factor, Yip1p, share structural and functional similarity with the spinal muscular atrophy-associated proteins SMN and SIP1. Hannus S, et al. Hum Mol Genet, 2000 Mar 22. PMID 10749973
    5. Oligomeric Properties of Survival Motor Neuron·Gemin2 Complexes. Gupta K, et al. J Biol Chem, 2015 Aug 14. PMID 26092730, Free PMC Article

    See all (17) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in mRNA cis splicing, via spliceosome IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in spliceosomal snRNP assembly ISO
    Inferred from Sequence Orthology
    more info
    		  
    Component Evidence Code Pubs
    part_of SMN complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SMN complex subunit Smn1/Gem1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      822092..822954 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001018486.3 → NP_593088.1  SMN complex subunit Smn1/Gem1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_593088.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q09808
    Nucleotide Protein
    Heading Accession and Version

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