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    torT periplasmic trimethylamine-N-oxide binding protein [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946289, updated on 3-Dec-2024

    Summary

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    Official Symbol
    torT
    Official Full Name
    periplasmic trimethylamine-N-oxide binding protein
    Primary source
    ECOCYC:G6515
    Locus tag
    b0994
    See related
    ASAP:ABE-0003360
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0985; yccH
    Summary
    TorT binds TMAO and interacts with the periplasmic domain of TorS (Baraquet, 2006). [More information is available at EcoGene: EG12616]. TorT is a periplasmic protein involved in the regulation of the torCAD operon, whose expression is induced in the presence of TMAO. [More information is available at EcoCyc: G6515].
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    Genomic context

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    Sequence:
    NC_000913.3 (1056261..1057289)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative electron transport protein YccM Neighboring gene sensor histidine kinase TorS Neighboring gene DNA-binding transcriptional dual regulator TorR Neighboring gene cytochrome c menaquinol dehydrogenase TorC Neighboring gene trimethylamine N-oxide reductase 1 Neighboring gene trimethylamine-N-oxide reductase-specific chaperone

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TorT, a member of a new periplasmic binding protein family, triggers induction of the Tor respiratory system upon trimethylamine N-oxide electron-acceptor binding in Escherichia coli. Baraquet C, et al. J Biol Chem, 2006 Dec 15. PMID 17040909
    2. The torR gene of Escherichia coli encodes a response regulator protein involved in the expression of the trimethylamine N-oxide reductase genes. Simon G, et al. J Bacteriol, 1994 Sep. PMID 8083154, Free PMC Article
    3. SRP and Sec pathway leader peptides for antibody phage display and antibody fragment production in E. coli. Thie H, et al. N Biotechnol, 2008 Jun. PMID 18504019
    4. The periplasmic TorT protein is required for trimethylamine N-oxide reductase gene induction in Escherichia coli. Jourlin C, et al. J Bacteriol, 1996 Feb. PMID 8576063, Free PMC Article
    5. An unorthodox sensor protein (TorS) mediates the induction of the tor structural genes in response to trimethylamine N-oxide in Escherichia coli. Jourlin C, et al. Mol Microbiol, 1996 Jun. PMID 8809780

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. N-terminus verified by Edman degradation on mature peptide
      Title: The periplasmic TorT protein is required for trimethylamine N-oxide reductase gene induction in Escherichia coli.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables transcription cis-regulatory region binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within anaerobic respiration IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in periplasmic space IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    periplasmic trimethylamine-N-oxide binding protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1056261..1057289
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415514.1 periplasmic trimethylamine-N-oxide binding protein [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415514.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A6M9WX71
      Conserved Domains (1) summary
      PRK10936
      Location:15 → 335
      PRK10936; TMAO reductase system periplasmic protein TorT; Provisional
    Nucleotide Protein
    Heading Accession and Version

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