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    RAVER2 ribonucleoprotein, PTB binding 2 [ Falco rusticolus (gyrfalcon) ]

    Gene ID: 119155513, updated on 3-Aug-2024

    Summary

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    Gene symbol
    RAVER2
    Gene description
    ribonucleoprotein, PTB binding 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Falco rusticolus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco
    Orthologs
    human mouse all
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    Genomic context

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    See RAVER2 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    100 current bFalRus1.pri (GCF_015220075.1) 11 NC_051197.1 (2639114..2678617, complement)

    Chromosome 11 - NC_051197.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119155542 Neighboring gene Janus kinase 1 Neighboring gene cache domain containing 1 Neighboring gene receptor tyrosine kinase like orphan receptor 1 Neighboring gene phosphoglucomutase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_051197.1 Chromosome 11 Reference bFalRus1.pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ribonucleoprotein PTB-binding 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Falco rusticolus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bFalRus1.pri Primary Assembly

    Genomic

    1. NC_051197.1 Reference bFalRus1.pri Primary Assembly

      Range
      2639114..2678617 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037404301.1 → XP_037260198.1  ribonucleoprotein PTB-binding 2 isoform X7

      Conserved Domains (4) summary
      cl38905
      Location:473 → 511
      longin-like; Longin-like domains
      cd12664
      Location:45 → 114
      RRM1_RAVER2; RNA recognition motif 1 (RRM1) found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cd12666
      Location:118 → 194
      RRM2_RAVER2; RNA recognition motif 2 (RRM2) found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cl17169
      Location:204 → 238
      RRM_SF; RNA recognition motif (RRM) superfamily

    2. XM_037404297.1 → XP_037260194.1  ribonucleoprotein PTB-binding 2 isoform X3

      Conserved Domains (4) summary
      cl38905
      Location:536 → 574
      longin-like; Longin-like domains
      cd12664
      Location:45 → 114
      RRM1_RAVER2; RNA recognition motif 1 (RRM1) found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cd12666
      Location:118 → 194
      RRM2_RAVER2; RNA recognition motif 2 (RRM2) found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cd12668
      Location:204 → 301
      RRM3_RAVER2; RNA recognition motif 3 (RRM3) found found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)

    3. XM_037404295.1 → XP_037260192.1  ribonucleoprotein PTB-binding 2 isoform X1

      Conserved Domains (4) summary
      cl38905
      Location:537 → 575
      longin-like; Longin-like domains
      cd12664
      Location:45 → 114
      RRM1_RAVER2; RNA recognition motif 1 (RRM1) found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cd12666
      Location:118 → 194
      RRM2_RAVER2; RNA recognition motif 2 (RRM2) found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cd12668
      Location:204 → 301
      RRM3_RAVER2; RNA recognition motif 3 (RRM3) found found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)

    4. XM_037404298.1 → XP_037260195.1  ribonucleoprotein PTB-binding 2 isoform X4

      Conserved Domains (4) summary
      cl38905
      Location:535 → 573
      longin-like; Longin-like domains
      cd12664
      Location:45 → 114
      RRM1_RAVER2; RNA recognition motif 1 (RRM1) found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cd12666
      Location:118 → 194
      RRM2_RAVER2; RNA recognition motif 2 (RRM2) found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cd12668
      Location:204 → 301
      RRM3_RAVER2; RNA recognition motif 3 (RRM3) found found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)

    5. XM_037404300.1 → XP_037260197.1  ribonucleoprotein PTB-binding 2 isoform X6

      Conserved Domains (4) summary
      cl38905
      Location:537 → 575
      longin-like; Longin-like domains
      cd12664
      Location:45 → 114
      RRM1_RAVER2; RNA recognition motif 1 (RRM1) found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cd12666
      Location:118 → 194
      RRM2_RAVER2; RNA recognition motif 2 (RRM2) found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cd12668
      Location:204 → 301
      RRM3_RAVER2; RNA recognition motif 3 (RRM3) found found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)

    6. XM_037404296.1 → XP_037260193.1  ribonucleoprotein PTB-binding 2 isoform X2

      Conserved Domains (4) summary
      cl38905
      Location:536 → 574
      longin-like; Longin-like domains
      cd12664
      Location:45 → 114
      RRM1_RAVER2; RNA recognition motif 1 (RRM1) found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cd12666
      Location:118 → 194
      RRM2_RAVER2; RNA recognition motif 2 (RRM2) found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cd12668
      Location:204 → 301
      RRM3_RAVER2; RNA recognition motif 3 (RRM3) found found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)

    7. XM_037404302.1 → XP_037260199.1  ribonucleoprotein PTB-binding 2 isoform X8

      Conserved Domains (4) summary
      cl38905
      Location:537 → 575
      longin-like; Longin-like domains
      cd12664
      Location:45 → 114
      RRM1_RAVER2; RNA recognition motif 1 (RRM1) found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cd12666
      Location:118 → 194
      RRM2_RAVER2; RNA recognition motif 2 (RRM2) found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cd12668
      Location:204 → 301
      RRM3_RAVER2; RNA recognition motif 3 (RRM3) found found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)

    8. XM_037404304.1 → XP_037260201.1  ribonucleoprotein PTB-binding 2 isoform X10

      Conserved Domains (4) summary
      cl38905
      Location:748 → 786
      longin-like; Longin-like domains
      cd12664
      Location:258 → 327
      RRM1_RAVER2; RNA recognition motif 1 (RRM1) found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cd12666
      Location:331 → 407
      RRM2_RAVER2; RNA recognition motif 2 (RRM2) found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cd12668
      Location:417 → 514
      RRM3_RAVER2; RNA recognition motif 3 (RRM3) found found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)

    9. XM_037404299.1 → XP_037260196.1  ribonucleoprotein PTB-binding 2 isoform X5

      Conserved Domains (4) summary
      cl38905
      Location:537 → 575
      longin-like; Longin-like domains
      cd12664
      Location:45 → 114
      RRM1_RAVER2; RNA recognition motif 1 (RRM1) found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cd12666
      Location:118 → 194
      RRM2_RAVER2; RNA recognition motif 2 (RRM2) found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cd12668
      Location:204 → 301
      RRM3_RAVER2; RNA recognition motif 3 (RRM3) found found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)

    10. XM_037404303.1 → XP_037260200.1  ribonucleoprotein PTB-binding 2 isoform X9

      Conserved Domains (4) summary
      cl38905
      Location:537 → 575
      longin-like; Longin-like domains
      cd12664
      Location:45 → 114
      RRM1_RAVER2; RNA recognition motif 1 (RRM1) found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cd12666
      Location:118 → 194
      RRM2_RAVER2; RNA recognition motif 2 (RRM2) found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cd12668
      Location:204 → 301
      RRM3_RAVER2; RNA recognition motif 3 (RRM3) found found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)

    11. XM_037404305.1 → XP_037260202.1  ribonucleoprotein PTB-binding 2 isoform X11

      Conserved Domains (4) summary
      cl38905
      Location:537 → 575
      longin-like; Longin-like domains
      cd12664
      Location:45 → 114
      RRM1_RAVER2; RNA recognition motif 1 (RRM1) found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cd12666
      Location:118 → 194
      RRM2_RAVER2; RNA recognition motif 2 (RRM2) found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cd12668
      Location:204 → 301
      RRM3_RAVER2; RNA recognition motif 3 (RRM3) found found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
    Nucleotide Protein
    Heading Accession and Version

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