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    F07D3.3 RRM domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 184140, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F07D3.3
    Official Full Name
    RRM domain-containing protein
    Primary source
    WormBase:WBGene00008556
    Locus tag
    CELE_F07D3.3
    See related
    AllianceGenome:WB:WBGene00008556
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable mRNA binding activity. Predicted to be involved in mRNA splice site recognition. Predicted to be active in cytosol. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F07D3.3 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    5
    Sequence:
    Chromosome: V; NC_003283.11 (9460593..9462705, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Cep57 centrosome microtubule-binding domain-containing protein;Protein kinase domain-containing protein;WD Repeat protein;WD_REPEATS_REGION domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene QQDSEVEREMM Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables mRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in mRNA splice site recognition IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    RRM domain-containing protein
    NP_505443.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      9460593..9462705 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_073042.4 → NP_505443.2  RRM domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_505443.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q19164
      Conserved Domains (1) summary
      TIGR01659
      Location:1 → 163
      sex-lethal; sex-lethal family splicing factor
    Nucleotide Protein
    Heading Accession and Version

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