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    F38B7.2 CX domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 185456, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F38B7.2
    Official Full Name
    CX domain-containing protein
    Primary source
    WormBase:WBGene00009533
    Locus tag
    CELE_F38B7.2
    See related
    AllianceGenome:WB:WBGene00009533
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F38B7.2 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    4
    Sequence:
    Chromosome: V; NC_003283.11 (11543963..11545295)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene C3H1-type domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene CX domain-containing protein Neighboring gene CX domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    CX domain-containing protein
    NP_001122940.1
    • Confirmed by transcript evidence
    NP_505928.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      11543963..11545295
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001129468.4 → NP_001122940.1  CX domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001122940.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A5Z2T1
      Conserved Domains (1) summary
      pfam01705
      Location:79 → 137
      CX; CX module

    2. NM_073527.3 → NP_505928.1  CX domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_505928.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20149
      Conserved Domains (1) summary
      pfam01705
      Location:69 → 127
      CX; CX module
    Nucleotide Protein
    Heading Accession and Version

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