Psgb1 pregnancy-specific beta 1-glycoprotein [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Psgb1provided by RGD
Official Full Name: pregnancy-specific beta 1-glycoproteinprovided by RGD
Primary source: RGD:727932
See related: EnsemblRapid:ENSRNOG00000027288 AllianceGenome:RGD:727932
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: Psg
Summary: Predicted to enable protein tyrosine kinase binding activity. Predicted to be involved in regulation of immune system process and signal transduction. Predicted to be active in cell surface and plasma membrane. Orthologous to human CEACAM1 (CEA cell adhesion molecule 1). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

Location:: 1q21

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	1	NC_086019.1 (87051246..87060681)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	1	NC_051336.1 (77923170..77932605)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	1	NC_005100.4 (79181855..79190738)

Chromosome 1 - NC_086019.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Markers

RH131610 (e-PCR)
- UniSTS:214893

AI179172 (e-PCR)
- UniSTS:250500

AI013412 (e-PCR)
- UniSTS:250263

Gene Ontology Provided by RGD

Function	Evidence Code	Pubs
enables protein tyrosine kinase binding	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in regulation of immune system process	IBA Inferred from Biological aspect of Ancestor more info
involved_in signal transduction	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cell surface	IBA Inferred from Biological aspect of Ancestor more info
is_active_in plasma membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: pregnancy-specific beta 1-glycoprotein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_021677.3 → NP_067709.2 pregnancy-specific beta 1-glycoprotein

Status: VALIDATED

Source sequence(s)

JAXUCZ010000001

UniProtKB/TrEMBL

A6J8G3, G3V925, Q9Z1D6

Related

ENSRNOP00000034066.2, ENSRNOT00000037132.4

Conserved Domains (3) summary

cd00096
Location:192 → 194

Ig; Ig strand A' [structural motif]

cd05774
Location:63 → 168

IgV_CEACAM_D1; First immunoglobulin (Ig)-like domain of carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM)

cl11960
Location:186 → 288

Ig; Immunoglobulin domain