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    SLC12A2 solute carrier family 12 member 2 [ Chlorocebus sabaeus (green monkey) ]

    Gene ID: 103244467, updated on 19-Jun-2024

    Summary

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    Gene symbol
    SLC12A2
    Gene description
    solute carrier family 12 member 2
    See related
    Ensembl:ENSCSAG00000014424
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chlorocebus sabaeus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
    Orthologs
    human mouse all
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    Genomic context

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    See SLC12A2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666034.1 (46918396..47021968, complement)
    100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 23 NC_023664.1 (31028514..31132263)

    NW_023666034.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 27 member 6 Neighboring gene fibrillin 2 Neighboring gene protein O-glucosyltransferase 2-like Neighboring gene coiled-coil domain containing 192 Neighboring gene cortexin 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ammonium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sodium:potassium:chloride symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell volume homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chloride ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chloride transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in potassium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in potassium ion import across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    solute carrier family 12 member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Vero_WHO_p1.0

    Genomic

    1. NW_023666034.1 Reference Vero_WHO_p1.0

      Range
      46918396..47021968 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008014304.2 → XP_008012495.2  solute carrier family 12 member 2 isoform X1

      UniProtKB/TrEMBL
      A0A0D9RPL1
      Conserved Domains (1) summary
      TIGR00930
      Location:214 → 1210
      2a30; K-Cl cotransporter

    2. XM_008014305.2 → XP_008012496.2  solute carrier family 12 member 2 isoform X2

      UniProtKB/TrEMBL
      A0A0D9RPL1
      Conserved Domains (1) summary
      TIGR00930
      Location:214 → 1194
      2a30; K-Cl cotransporter
    Nucleotide Protein
    Heading Accession and Version

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