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    LOC6557777 tectonin beta-propeller repeat-containing protein [ Drosophila grimshawi ]

    Gene ID: 6557777, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC6557777
    Gene description
    tectonin beta-propeller repeat-containing protein
    Locus tag
    Dgri_GH16968
    See related
    EnsemblRapid:LOC6557777
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila grimshawi
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
    Also known as
    GH16968; GH16968-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC6557777 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025063240.1 (4534231..4539143, complement)
    102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961672.1 (19004813..19009725)

    NW_025063240.1Genomic Context describing neighboring genes Neighboring gene protein inturned Neighboring gene FSHD region gene 1 Neighboring gene glutaredoxin-C4 Neighboring gene Biogenesis of lysosome-related organelles complex 1, subunit 3 Neighboring gene cell cycle checkpoint control protein Rad9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables carbohydrate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tectonin beta-propeller repeat-containing protein
    Names
    Dgri\GH16968
    Dgri\GH16968-PA
    dgri_GLEANR_16615

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1815329v1

    Genomic

    1. NW_025063240.1 Reference ASM1815329v1

      Range
      4534231..4539143 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001985234.2 → XP_001985270.1  tectonin beta-propeller repeat-containing protein

      See identical proteins and their annotated locations for XP_001985270.1

      UniProtKB/TrEMBL
      B4IYE5
      Related
      XP_001985270.1, XM_001985234.2
      Conserved Domains (7) summary
      smart00694
      Location:1092 → 1125
      DysFC; Dysferlin domain, C-terminal region
      smart00693
      Location:64 → 125
      DysFN; Dysferlin domain, N-terminal region
      smart00706
      Location:345 → 378
      TECPR; Beta propeller repeats in Physarum polycephalum tectonins, Limulus lectin L-6 and animal hypothetical proteins
      pfam00169
      Location:702 → 757
      PH; PH domain
      pfam00337
      Location:815 → 954
      Gal-bind_lectin; Galactoside-binding lectin
      pfam06462
      Location:1208 → 1236
      Hyd_WA; Propeller
      cl17171
      Location:644 → 764
      PH-like; Pleckstrin homology-like domain
    Nucleotide Protein
    Heading Accession and Version

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