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    rdgBbeta cytoplasmic phosphatidylinositol transfer protein 1 [ Drosophila grimshawi ]

    Gene ID: 6559505, updated on 3-Jul-2024

    Summary

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    Gene symbol
    rdgBbeta
    Gene description
    cytoplasmic phosphatidylinositol transfer protein 1
    Locus tag
    Dgri_GH20541
    See related
    EnsemblRapid:LOC6559505
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila grimshawi
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
    Also known as
    GH20541; GH20541-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See rdgBbeta in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025062889.1 (10771070..10773792, complement)
    102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961673.1 (6749442..6752234, complement)

    NW_025062889.1Genomic Context describing neighboring genes Neighboring gene putative gustatory receptor 58b Neighboring gene Protein singed wings 2 Neighboring gene uncharacterized LOC6560242 Neighboring gene kelch-like protein 3 Neighboring gene peptidoglycan-recognition protein SC2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol transfer activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in phospholipid transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytoplasmic phosphatidylinositol transfer protein 1
    Names
    Dgri\GH20541
    Dgri\GH20541-PA
    dgri_GLEANR_4782

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1815329v1

    Genomic

    1. NW_025062889.1 Reference ASM1815329v1

      Range
      10771070..10773792 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001986379.3 → XP_001986415.1  cytoplasmic phosphatidylinositol transfer protein 1

      See identical proteins and their annotated locations for XP_001986415.1

      UniProtKB/TrEMBL
      B4J8L5
      Related
      XP_001986415.1, XM_001986379.3
      Conserved Domains (1) summary
      cd08890
      Location:3 → 251
      SRPBCC_PITPNC1_like; Lipid-binding SRPBCC domain of mammalian PITPNC1,and related proteins (Class IIB PITPs)
    Nucleotide Protein
    Heading Accession and Version

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