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    Smox Smad on X [ Drosophila yakuba ]

    Gene ID: 6525349, updated on 23-May-2024

    Summary

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    Gene symbol
    Smox
    Gene description
    Smad on X
    Locus tag
    Dyak_GE17479
    See related
    EnsemblRapid:LOC6525349
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila yakuba
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GE17479; GE17479-PB
    Orthologs
    fruit fly all
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    Genomic context

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    See Smox in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    102 current Prin_Dyak_Tai18E2_2.1 (GCF_016746365.2) X NC_052526.2 (13732000..13737098)
    101 previous assembly Prin_Dyak_Tai18E2_2.0 (GCF_016746365.1) X NC_052526.1 (13732058..13737156)

    Chromosome X - NC_052526.2Genomic Context describing neighboring genes Neighboring gene phenylalanine--tRNA ligase alpha subunit Neighboring gene uncharacterized LOC6525348 Neighboring gene zinc finger protein 239 Neighboring gene dynein regulatory complex protein 1 homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables I-SMAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in BMP signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in SMAD protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in anatomical structure morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transforming growth factor beta receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of heteromeric SMAD protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mothers against decapentaplegic homolog 3
    Names
    Dyak\GE17479
    Dyak\GE17479-PB
    dyak_GLEANR_18805

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila yakuba Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

    Genomic

    1. NC_052526.2 Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

      Range
      13732000..13737098
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002101149.3 → XP_002101185.1  mothers against decapentaplegic homolog 3

      UniProtKB/TrEMBL
      B4Q0M2
      Related
      XP_002101185.1, XM_002101149.3
      Conserved Domains (2) summary
      cd10488
      Location:7 → 130
      MH1_R-SMAD; N-terminal Mad Homology 1 (MH1) domain of receptor regulated SMADs
      cd10985
      Location:285 → 475
      MH2_SMAD_2_3; C-terminal Mad Homology 2 (MH2) domain in SMAD2 and SMAD3
    Nucleotide Protein Strain
    Heading Accession and Version

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