U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    RBL1 RB transcriptional corepressor like 1 [ Motacilla alba alba ]

    Gene ID: 119710422, updated on 3-Aug-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    RBL1
    Gene description
    RB transcriptional corepressor like 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Motacilla alba alba (sub-species: alba)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Motacillidae; Motacilla
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See RBL1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    100 current Motacilla_alba_V1.0_pri (GCF_015832195.1) 20 NC_052035.1 (792345..818505)

    Chromosome 20 - NC_052035.1Genomic Context describing neighboring genes Neighboring gene Ral GTPase activating protein non-catalytic subunit beta Neighboring gene chromodomain helicase DNA binding protein 6 Neighboring gene SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 Neighboring gene TBC/LysM-associated domain containing 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_052035.1 Chromosome 20 Reference Motacilla_alba_V1.0_pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of G1/S transition of mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    retinoblastoma-like protein 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Motacilla alba alba Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Motacilla_alba_V1.0_pri Primary Assembly

    Genomic

    1. NC_052035.1 Reference Motacilla_alba_V1.0_pri Primary Assembly

      Range
      792345..818505
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038159438.1 → XP_038015366.1  retinoblastoma-like protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A7K5BN14
      Conserved Domains (4) summary
      pfam01858
      Location:414 → 607
      RB_A; Retinoblastoma-associated protein A domain
      pfam08934
      Location:982 → 1067
      Rb_C; Rb C-terminal domain
      pfam11934
      Location:72 → 201
      DUF3452; Domain of unknown function (DUF3452)
      cd20605
      Location:800 → 970
      CYCLIN_RBL1; cyclin box found in retinoblastoma-like protein 1 (RBL1) and similar proteins

    2. XM_038159439.1 → XP_038015367.1  retinoblastoma-like protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A7K5BN14
      Conserved Domains (4) summary
      pfam01858
      Location:411 → 604
      RB_A; Retinoblastoma-associated protein A domain
      pfam08934
      Location:979 → 1064
      Rb_C; Rb C-terminal domain
      pfam11934
      Location:72 → 201
      DUF3452; Domain of unknown function (DUF3452)
      cd20605
      Location:797 → 967
      CYCLIN_RBL1; cyclin box found in retinoblastoma-like protein 1 (RBL1) and similar proteins

    3. XM_038159440.1 → XP_038015368.1  retinoblastoma-like protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A7K5BN14
      Conserved Domains (4) summary
      pfam01858
      Location:379 → 572
      RB_A; Retinoblastoma-associated protein A domain
      pfam08934
      Location:947 → 1032
      Rb_C; Rb C-terminal domain
      pfam11934
      Location:72 → 201
      DUF3452; Domain of unknown function (DUF3452)
      cd20605
      Location:765 → 935
      CYCLIN_RBL1; cyclin box found in retinoblastoma-like protein 1 (RBL1) and similar proteins

    4. XM_038159442.1 → XP_038015370.1  retinoblastoma-like protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A7K5BN14
      Conserved Domains (4) summary
      pfam01858
      Location:336 → 529
      RB_A; Retinoblastoma-associated protein A domain
      pfam08934
      Location:904 → 989
      Rb_C; Rb C-terminal domain
      pfam11934
      Location:72 → 178
      DUF3452; Domain of unknown function (DUF3452)
      cd20605
      Location:722 → 892
      CYCLIN_RBL1; cyclin box found in retinoblastoma-like protein 1 (RBL1) and similar proteins

    5. XM_038159441.1 → XP_038015369.1  retinoblastoma-like protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A7K5BN14
      Conserved Domains (4) summary
      pfam01858
      Location:376 → 569
      RB_A; Retinoblastoma-associated protein A domain
      pfam08934
      Location:944 → 1029
      Rb_C; Rb C-terminal domain
      pfam11934
      Location:72 → 201
      DUF3452; Domain of unknown function (DUF3452)
      cd20605
      Location:762 → 932
      CYCLIN_RBL1; cyclin box found in retinoblastoma-like protein 1 (RBL1) and similar proteins

    6. XM_038159443.1 → XP_038015371.1  retinoblastoma-like protein 1 isoform X6

      UniProtKB/TrEMBL
      A0A7K5BN14
      Conserved Domains (4) summary
      pfam01858
      Location:318 → 511
      RB_A; Retinoblastoma-associated protein A domain
      pfam08934
      Location:886 → 971
      Rb_C; Rb C-terminal domain
      pfam11934
      Location:1 → 105
      DUF3452; Domain of unknown function (DUF3452)
      cd20605
      Location:704 → 874
      CYCLIN_RBL1; cyclin box found in retinoblastoma-like protein 1 (RBL1) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.