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    LOC119740695 semaphorin-5B-like [ Patiria miniata (bat star) ]

    Gene ID: 119740695, updated on 11-Jan-2024

    Summary

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    Gene symbol
    LOC119740695
    Gene description
    semaphorin-5B-like
    See related
    EnsemblRapid:LOC119740695
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Patiria miniata
    Lineage
    Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Asterozoa; Asteroidea; Valvatacea; Valvatida; Asterinidae; Patiria
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    Genomic context

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    See LOC119740695 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    100 current ASM1570657v1 (GCF_015706575.1) Unplaced Scaffold NW_024037072.1 (12267029..12284110, complement)

    NW_024037072.1Genomic Context describing neighboring genes Neighboring gene hepatic lectin-like Neighboring gene death-associated protein kinase 1-like Neighboring gene uncharacterized LOC119740696 Neighboring gene uncharacterized LOC119740697

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024037072 Unplaced Scaffold Reference ASM1570657v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chemorepellent activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables semaphorin receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of axon extension involved in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neural crest cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in semaphorin-plexin signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    semaphorin-5B-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Patiria miniata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1570657v1

    Genomic

    1. NW_024037072.1 Reference ASM1570657v1

      Range
      12267029..12284110 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038216072.1 → XP_038072000.1  semaphorin-5B-like

      UniProtKB/TrEMBL
      A0A914B853
      Related
      XP_038072000.1, XM_038216072.1
      Conserved Domains (1) summary
      smart00630
      Location:73 → 459
      Sema; semaphorin domain
    Nucleotide Protein
    Heading Accession and Version

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