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    LOC6552492 protein no-on-transient A [ Drosophila erecta ]

    Gene ID: 6552492, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC6552492
    Gene description
    protein no-on-transient A
    Locus tag
    Dere_GG21764
    See related
    EnsemblRapid:LOC6552492
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila erecta
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GG21764; GG21764-PA; GG21764-PB
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC6552492 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    101 current DereRS2 (GCF_003286155.1) Unplaced Scaffold NW_020825194.1 (19364778..19367374)

    NW_020825194.1Genomic Context describing neighboring genes Neighboring gene fatty acyl-CoA reductase wat Neighboring gene Coiled-coil domain containing protein 114 Neighboring gene fasciclin-1 Neighboring gene ADP-ribosylation factor-like 6 interacting protein 1 Neighboring gene G-patch domain and KOW motifs-containing protein Neighboring gene chaperonin containing TCP1 subunit 3 Neighboring gene Methyltransferase like 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020825194 Unplaced Scaffold Reference DereRS2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein no-on-transient A
    Names
    Dere\GG21764
    Dere\GG21764-PA
    Dere\GG21764-PB
    dere_GLEANR_655

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila erecta Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference DereRS2

    Genomic

    1. NW_020825194.1 Reference DereRS2

      Range
      19364778..19367374
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001979805.3 → XP_001979841.1  protein no-on-transient A

      See identical proteins and their annotated locations for XP_001979841.1

      UniProtKB/TrEMBL
      B3NZC7
      Related
      XP_001979841.1, XM_001979805.3
      Conserved Domains (5) summary
      cd12945
      Location:437 → 536
      NOPS_NONA_like; NOPS domain, including C-terminal coiled-coil region, in p54nrb/PSF/PSP1 homologs from invertebrate species
      cd12332
      Location:291 → 361
      RRM1_p54nrb_like; RNA recognition motif 1 in the p54nrb/PSF/PSP1 family
      cd12333
      Location:367 → 446
      RRM2_p54nrb_like; RNA recognition motif 2 in the p54nrb/PSF/PSP1 family
      cd16269
      Location:587 → 596
      GBP_C; coiled coil [structural motif]
      cl20817
      Location:493 → 604
      GBP_C; Guanylate-binding protein, C-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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