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    LOC6051347 dynamin [ Culex quinquefasciatus (southern house mosquito) ]

    Gene ID: 6051347, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC6051347
    Gene description
    dynamin
    See related
    VectorBase:CQUJHB018255; EnsemblRapid:LOC6051347
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Culex quinquefasciatus
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Culicini; Culex; Culex
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC6051347 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    100 current VPISU_Cqui_1.0_pri_paternal (GCF_015732765.1) 3 NC_051863.1 (90699956..91215652, complement)

    Chromosome 3 - NC_051863.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119770061 Neighboring gene uncharacterized LOC119770062 Neighboring gene uncharacterized LOC119769064 Neighboring gene uncharacterized LOC119769760 Neighboring gene uncharacterized LOC6053187 Neighboring gene 40S ribosomal protein SA-like Neighboring gene uncharacterized LOC119769756 Neighboring gene histone-lysine N-methyltransferase NSD2 Neighboring gene uncharacterized LOC119769757 Neighboring gene histone-lysine N-methyltransferase NSD2 Neighboring gene uncharacterized LOC119769759 Neighboring gene uncharacterized LOC6050335 Neighboring gene uncharacterized LOC119770260 Neighboring gene uncharacterized LOC119770259 Neighboring gene Syntaxin-binding protein Rop

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_051863.1 Chromosome 3 Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in receptor-mediated endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dynamin
    Names
    dynamnin-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Culex quinquefasciatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

    Genomic

    1. NC_051863.1 Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

      Range
      90699956..91215652 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038263306.1 → XP_038119234.1  dynamin isoform X3

      Related
      XP_038119234.1, XM_038263306.1
      Conserved Domains (5) summary
      smart00302
      Location:650 → 741
      GED; Dynamin GTPase effector domain
      smart00053
      Location:1 → 240
      DYNc; Dynamin, GTPase
      cd01256
      Location:512 → 623
      PH_dynamin; Dynamin pleckstrin homology (PH) domain
      pfam01031
      Location:211 → 498
      Dynamin_M; Dynamin central region
      pfam06346
      Location:747 → 846
      Drf_FH1; Formin Homology Region 1

    2. XM_038263308.1 → XP_038119236.1  dynamin isoform X5

      Related
      XP_038119236.1, XM_038263308.1
      Conserved Domains (5) summary
      smart00302
      Location:650 → 741
      GED; Dynamin GTPase effector domain
      smart00053
      Location:1 → 240
      DYNc; Dynamin, GTPase
      PHA03247
      Location:739 → 842
      PHA03247; large tegument protein UL36; Provisional
      cd01256
      Location:512 → 623
      PH_dynamin; Dynamin pleckstrin homology (PH) domain
      pfam01031
      Location:211 → 498
      Dynamin_M; Dynamin central region

    3. XM_038263307.1 → XP_038119235.1  dynamin isoform X4

      Related
      XP_038119235.1, XM_038263307.1
      Conserved Domains (5) summary
      smart00302
      Location:650 → 741
      GED; Dynamin GTPase effector domain
      smart00053
      Location:1 → 240
      DYNc; Dynamin, GTPase
      PHA03247
      Location:739 → 876
      PHA03247; large tegument protein UL36; Provisional
      cd01256
      Location:512 → 623
      PH_dynamin; Dynamin pleckstrin homology (PH) domain
      pfam01031
      Location:211 → 498
      Dynamin_M; Dynamin central region

    4. XM_038263305.1 → XP_038119233.1  dynamin isoform X2

      Related
      XP_038119233.1, XM_038263305.1
      Conserved Domains (5) summary
      smart00302
      Location:645 → 736
      GED; Dynamin GTPase effector domain
      smart00053
      Location:1 → 240
      DYNc; Dynamin, GTPase
      PHA03247
      Location:734 → 837
      PHA03247; large tegument protein UL36; Provisional
      cd01256
      Location:512 → 623
      PH_dynamin; Dynamin pleckstrin homology (PH) domain
      pfam01031
      Location:211 → 498
      Dynamin_M; Dynamin central region

    5. XM_038263304.1 → XP_038119232.1  dynamin isoform X1

      Related
      XP_038119232.1, XM_038263304.1
      Conserved Domains (5) summary
      smart00302
      Location:650 → 741
      GED; Dynamin GTPase effector domain
      smart00053
      Location:1 → 240
      DYNc; Dynamin, GTPase
      PHA03247
      Location:739 → 842
      PHA03247; large tegument protein UL36; Provisional
      cd01256
      Location:512 → 623
      PH_dynamin; Dynamin pleckstrin homology (PH) domain
      pfam01031
      Location:211 → 498
      Dynamin_M; Dynamin central region

    6. XM_038263309.1 → XP_038119237.1  dynamin isoform X6

      Related
      XP_038119237.1, XM_038263309.1
      Conserved Domains (5) summary
      smart00302
      Location:650 → 741
      GED; Dynamin GTPase effector domain
      smart00053
      Location:1 → 240
      DYNc; Dynamin, GTPase
      PHA03247
      Location:739 → 842
      PHA03247; large tegument protein UL36; Provisional
      cd01256
      Location:512 → 623
      PH_dynamin; Dynamin pleckstrin homology (PH) domain
      pfam01031
      Location:211 → 498
      Dynamin_M; Dynamin central region
    Nucleotide Protein Strain
    Heading Accession and Version

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