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    foxp2 forkhead box P2 [ Scyliorhinus canicula (smaller spotted catshark) ]

    Gene ID: 119954991, updated on 21-Mar-2024

    Summary

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    Gene symbol
    foxp2
    Gene description
    forkhead box P2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Scyliorhinus canicula
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Carcharhiniformes; Scyliorhinidae; Scyliorhinus
    Orthologs
    human zebrafish all
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    Genomic context

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    See foxp2 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    100 current sScyCan1.1 (GCF_902713615.1) 20 NC_052165.1 (9663712..10124323)

    Chromosome 20 - NC_052165.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119955019 Neighboring gene uncharacterized LOC119955020 Neighboring gene uncharacterized LOC119954992 Neighboring gene MyoD family inhibitor domain containing Neighboring gene uncharacterized LOC119954888

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_052165.1 Chromosome 20 Reference sScyCan1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    forkhead box protein P2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Scyliorhinus canicula Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference sScyCan1.1 Primary Assembly

    Genomic

    1. NC_052165.1 Reference sScyCan1.1 Primary Assembly

      Range
      9663712..10124323
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038780768.1 → XP_038636696.1  forkhead box protein P2 isoform X1

      Conserved Domains (2) summary
      pfam16159
      Location:324 → 391
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:485 → 566
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

    2. XM_038780769.1 → XP_038636697.1  forkhead box protein P2 isoform X1

      Conserved Domains (2) summary
      pfam16159
      Location:324 → 391
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:485 → 566
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

    3. XM_038780767.1 → XP_038636695.1  forkhead box protein P2 isoform X1

      Conserved Domains (2) summary
      pfam16159
      Location:324 → 391
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:485 → 566
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

    4. XM_038780770.1 → XP_038636698.1  forkhead box protein P2 isoform X1

      Conserved Domains (2) summary
      pfam16159
      Location:324 → 391
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:485 → 566
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

    5. XM_038780771.1 → XP_038636699.1  forkhead box protein P2 isoform X1

      Conserved Domains (2) summary
      pfam16159
      Location:324 → 391
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:485 → 566
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

    6. XM_038780772.1 → XP_038636700.1  forkhead box protein P2 isoform X2

      Conserved Domains (2) summary
      pfam16159
      Location:323 → 390
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:484 → 565
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)
    Nucleotide Protein
    Heading Accession and Version

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