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    SfVp40 transcriptional activator [ Enterobacteria phage SfV ]

    Gene ID: 935193, updated on 7-Jan-2023

    Summary

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    Gene symbol
    SfVp40
    Gene description
    transcriptional activator
    Locus tag
    SfVp40
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Enterobacteria phage SfV (nat-host: Shigella flexneri)
    Lineage
    Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Myoviridae
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    Genomic context

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    Sequence:
    NC_003444.1 (29126..29614)

    NC_003444.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene transcriptional regulator Neighboring gene hypothetical protein Neighboring gene replication protein Neighboring gene phosphoadenosine phosphosulfate reductase Neighboring gene transcriptional repressor Neighboring gene RusA family crossover junction endodeoxyribonuclease Neighboring gene transcriptional regulator

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003444.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Complete genomic sequence of SfV, a serotype-converting temperate bacteriophage of Shigella flexneri. Allison GE, et al. J Bacteriol, 2002 Apr. PMID 11889106, Free PMC Article
    2. Shigella flexneri type-specific antigen V: cloning, sequencing and characterization of the glucosyl transferase gene of temperate bacteriophage SfV. Huan PT, et al. Gene, 1997 Aug 22. PMID 9305766

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    regulatory

    • Loc: 29523-29528 regulatory_class = minus_35_signal
    • Loc: 29544-29549 regulatory_class = minus_10_signal

    General protein information

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    Preferred Names
    transcriptional activator
    NP_599072.1
    • orf40

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003444.1 Reference assembly

      Range
      29126..29614
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_599072.1 transcriptional activator [Enterobacteria phage SfV]

      See identical proteins and their annotated locations for NP_599072.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SBF0
      Conserved Domains (1) summary
      pfam06069
      Location:98 → 145
      PerC; PerC transcriptional activator
    Nucleotide Protein
    Heading Accession and Version

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