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    LOC100361636 vasculin-like protein 1-like [ Rattus norvegicus (Norway rat) ]

    Gene ID: 100361636, updated on 4-Jan-2025

    Summary

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    Symbol
    LOC100361636provided by RGD
    Full Name
    vasculin-like protein 1-likeprovided by RGD
    Primary source
    RGD:2319736
    See related
    EnsemblRapid:ENSRNOG00000033346 AllianceGenome:RGD:2319736
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable DNA binding activity and RNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Jan 2025]
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    Genomic context

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    See LOC100361636 in Genome Data Viewer
    Location:
    14q22
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (100808668..100812047)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (96607442..96610952)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (107392042..107395562)

    Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 17 Neighboring gene transfer RNA proline (anticodon AGG) 86 Neighboring gene ribosomal protein L28 like 3 Neighboring gene uncharacterized LOC120096692 Neighboring gene uncharacterized LOC102552091

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in positive regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in regulation of DNA-templated transcription IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    vasculin-like protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086032.1 Reference GRCr8

      Range
      100808668..100812047
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039092877.2 → XP_038948805.1  vasculin-like protein 1

      UniProtKB/TrEMBL
      A0A8I6GJT3
      Related
      ENSRNOP00000091623.1, ENSRNOT00000041470.5
      Conserved Domains (1) summary
      pfam15337
      Location:382 → 472
      Vasculin; Vascular protein family Vasculin-like 1
    Nucleotide Protein Strain
    Heading Accession and Version

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