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    PNUC_RS06840 tol-pal system YbgF family protein [ Polynucleobacter asymbioticus QLW-P1DMWA-1 ]

    Gene ID: 31481693, updated on 11-Dec-2024

    Summary

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    Gene symbol
    PNUC_RS06840
    Gene description
    tol-pal system YbgF family protein
    Locus tag
    PNUC_RS06840
    Gene type
    protein coding
    Organism
    Polynucleobacter asymbioticus QLW-P1DMWA-1 (strain: QLW-P1DMWA-1, culture-collection: DSM:18221, type-material: type strain of Polynucleobacter necessarius subsp. asymbioticus)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter
    Old locus tag
    Pnuc_1304
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    Genomic context

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    Sequence:
    NC_009379.1 (1378156..1378977, complement)

    NC_009379.1Genomic Context describing neighboring genes Neighboring gene TolC family protein Neighboring gene DUF1993 family protein Neighboring gene exodeoxyribonuclease V subunit beta Neighboring gene PD-(D/E)XK nuclease family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009379.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The passive yet successful way of planktonic life: genomic and experimental analysis of the ecology of a free-living polynucleobacter population. Hahn MW, et al. PLoS One, 2012. PMID 22448227, Free PMC Article
    2. Complete genome sequence of Polynucleobacter necessarius subsp. asymbioticus type strain (QLW-P1DMWA-1(T)). Meincke L, et al. Stand Genomic Sci, 2012 Mar 19. PMID 22675600, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    tol-pal system YbgF family protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009379.1 Reference assembly

      Range
      1378156..1378977 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_201721395.1 tol-pal system YbgF family protein [Polynucleobacter asymbioticus]

      UniProtKB/TrEMBL
      A0AAC9NGL9
      Conserved Domains (2) summary
      sd00006
      Location:61 → 91
      TPR; TPR repeat [structural motif]
      pfam14559
      Location:38 → 110
      TPR_19; Tetratricopeptide repeat