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    rbl2 retinoblastoma-like 2 (p130) [ Polypterus senegalus (gray bichir) ]

    Gene ID: 120535215, updated on 8-May-2024

    Summary

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    Gene symbol
    rbl2
    Gene description
    retinoblastoma-like 2 (p130)
    Locus tag
    GTO96_0022484
    See related
    EnsemblRapid:ENSSTSG00000021862
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Polypterus senegalus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Polypteriformes; Polypteridae; Polypterus
    Also known as
    Rbl2_0; Rbl2_1
    Orthologs
    human zebrafish all
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    Genomic context

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    See rbl2 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    100 current ASM1683550v1 (GCF_016835505.1) 9 NC_053162.1 (35151183..35227377)

    Chromosome 9 - NC_053162.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120534939 Neighboring gene chromodomain helicase DNA binding protein 9 Neighboring gene akt interacting protein Neighboring gene RPGRIP1 like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_053162.1 Chromosome 9 Reference ASM1683550v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of G1/S transition of mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    retinoblastoma-like protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Polypterus senegalus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1683550v1 Primary Assembly

    Genomic

    1. NC_053162.1 Reference ASM1683550v1 Primary Assembly

      Range
      35151183..35227377
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039762910.1 → XP_039618844.1  retinoblastoma-like protein 2

      Related
      ENSSTSP00000050994.1, ENSSTST00000057683.1
      Conserved Domains (1) summary
      smart00385
      Location:791 → 858
      CYCLIN; domain present in cyclins, TFIIB and Retinoblastoma
    Nucleotide Protein
    Heading Accession and Version

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