U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    SLC12A2 solute carrier family 12 member 2 [ Saimiri boliviensis (Bolivian squirrel monkey) ]

    Gene ID: 101043035, updated on 18-Nov-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    SLC12A2
    Gene description
    solute carrier family 12 member 2
    See related
    EnsemblRapid:ENSSBOG00000025766
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Saimiri boliviensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SLC12A2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100917.1 (119787573..119894734)
    101 previous assembly SaiBol1.0 (GCF_000235385.1) Unplaced Scaffold NW_003943605.1 (12813239..12919951, complement)

    NW_024100917.1Genomic Context describing neighboring genes Neighboring gene U7 small nuclear RNA Neighboring gene coiled-coil domain containing 192 Neighboring gene fibrillin 2 Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ammonium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sodium:potassium:chloride symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell volume homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chloride ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chloride transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in potassium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in potassium ion import across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    solute carrier family 12 member 2
    Names
    solute carrier family 12 (sodium/potassium/chloride transporters), member 2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference BCM_Sbol_2.0 Primary Assembly

    Genomic

    1. NW_024100917.1 Reference BCM_Sbol_2.0 Primary Assembly

      Range
      119787573..119894734
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003920920.3 → XP_003920969.3  solute carrier family 12 member 2 isoform X2

      UniProtKB/TrEMBL
      A0A2K6TFI8
      Related
      ENSSBOP00000018413.2, ENSSBOT00000035229.2
      Conserved Domains (1) summary
      TIGR00930
      Location:212 → 1208
      2a30; K-Cl cotransporter

    2. XM_039467851.1 → XP_039323785.1  solute carrier family 12 member 2 isoform X1

      UniProtKB/TrEMBL
      A0A2K6TFI8
      Related
      ENSSBOP00000018423.2, ENSSBOT00000035239.2
      Conserved Domains (1) summary
      TIGR00930
      Location:212 → 1192
      2a30; K-Cl cotransporter
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.