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    LOC120393847 zinc finger protein RFP-like [ Mauremys reevesii (Reeves's turtle) ]

    Gene ID: 120393847, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC120393847
    Gene description
    zinc finger protein RFP-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mauremys reevesii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
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    Genomic context

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    See LOC120393847 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current ASM1616193v1 (GCF_016161935.1) Unplaced Scaffold NW_024100845.1 (518415..526911, complement)

    NW_024100845.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein RFP-like Neighboring gene uncharacterized LOC120393850 Neighboring gene uncharacterized LOC120393848 Neighboring gene zinc finger protein RFP-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024100845 Unplaced Scaffold Reference ASM1616193v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein RFP-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1616193v1 Primary Assembly

    Genomic

    1. NW_024100845.1 Reference ASM1616193v1 Primary Assembly

      Range
      518415..526911 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039518343.1 → XP_039374277.1  zinc finger protein RFP-like

      Conserved Domains (4) summary
      cd12888
      Location:316 → 486
      SPRY_PRY_TRIM7_like; PRY/SPRY domain in tripartite motif-binding protein 7 (TRIM7)-like, including TRIM7, TRIM10, TRIM15, TRIM26, TRIM39, TRIM41
      cd16594
      Location:13 → 57
      RING-HC_TRIM11_like_C-IV; RING finger, HC subclass, found in tripartite motif-containing proteins, TRIM11 and TRIM27, and similar proteins
      cd19762
      Location:93 → 136
      Bbox2_TRIM7-like; B-box-type 2 zinc finger found in tripartite motif-containing proteins TRIM7, TRIM27 and similar proteins
      pfam08317
      Location:131 → 283
      Spc7; Spc7 kinetochore protein
    Nucleotide Protein
    Heading Accession and Version

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