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    LOC120369058 uncharacterized LOC120369058 [ Mauremys reevesii (Reeves's turtle) ]

    Gene ID: 120369058, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC120369058
    Gene description
    uncharacterized LOC120369058
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mauremys reevesii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
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    Genomic context

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    See LOC120369058 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    26
    Annotation release Status Assembly LG Location
    100 current ASM1616193v1 (GCF_016161935.1) 7 NC_052629.1 (95475362..95525585, complement)

    Linkage Group 7 - NC_052629.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120369057 Neighboring gene solute carrier family 22 member 6-A-like Neighboring gene galectin 12 Neighboring gene phospholipase A and acyltransferase 3-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_052629.1 Chromosome 7 Reference ASM1616193v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables iron-sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA integration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in iron-sulfur cluster assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC120369058

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1616193v1 Primary Assembly

    Genomic

    1. NC_052629.1 Reference ASM1616193v1 Primary Assembly

      Range
      95475362..95525585 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039481949.1 → XP_039337883.1  uncharacterized protein LOC120369058

      Conserved Domains (8) summary
      PHA03378
      Location:559 → 669
      PHA03378; EBNA-3B; Provisional
      cd01647
      Location:1203 → 1378
      RT_LTR; Reverse transcriptases (RTs) from retrotransposons and retroviruses which have long terminal repeats (LTRs) in their DNA copies but not in their RNA template. RT catalyzes DNA replication from an RNA template, and is responsible for the replication of ...
      TIGR00898
      Location:11 → 526
      2A0119; cation transport protein
      cd17446
      Location:1595 → 2000
      MFS_SLC22A6_OAT1_like; Solute carrier family 22 member 6 (also called Organic anion transporter 1) and similar transporters of the Major Facilitator Superfamily
      pfam00665
      Location:1107 → 1191
      rve; Integrase core domain
      pfam02023
      Location:894 → 951
      SCAN; SCAN domain
      pfam17919
      Location:1443 → 1481
      RT_RNaseH_2; RNase H-like domain found in reverse transcriptase
      cl00400
      Location:651 → 784
      Fe-S_biosyn; Iron-sulphur cluster biosynthesis
    Nucleotide Protein
    Heading Accession and Version

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