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    aspa aspartoacylase [ Pimephales promelas (fathead minnow) ]

    Gene ID: 120495092, updated on 21-Mar-2024

    Summary

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    Gene symbol
    aspa
    Gene description
    aspartoacylase
    Locus tag
    F2P79_016882
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pimephales promelas
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Leuciscidae; Pogonichthyinae; Pimephales
    Orthologs
    human zebrafish all
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    Genomic context

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    See aspa in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current EPA_FHM_2.0 (GCF_016745375.1) Unplaced Scaffold NW_024121455.1 (4445372..4515340)

    NW_024121455.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120495101 Neighboring gene uncharacterized LOC120495102 Neighboring gene uncharacterized LOC120494967 Neighboring gene uncharacterized LOC120494966

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024121455 Unplaced Scaffold Reference EPA_FHM_2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hydrolase activity, acting on ester bonds IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    aspartoacylase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pimephales promelas Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EPA_FHM_2.0 Primary Assembly

    Genomic

    1. NW_024121455.1 Reference EPA_FHM_2.0 Primary Assembly

      Range
      4445372..4515340
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039694499.1 → XP_039550433.1  aspartoacylase isoform X1

      Conserved Domains (1) summary
      cd06909
      Location:14 → 178
      M14_ASPA; Peptidase M14 Aspartoacylase (ASPA) subfamily

    2. XM_039694500.1 → XP_039550434.1  aspartoacylase isoform X2

      Conserved Domains (1) summary
      cd06909
      Location:14 → 178
      M14_ASPA; Peptidase M14 Aspartoacylase (ASPA) subfamily

    3. XM_039694501.1 → XP_039550435.1  aspartoacylase isoform X3

      Conserved Domains (1) summary
      cd06909
      Location:14 → 178
      M14_ASPA; Peptidase M14 Aspartoacylase (ASPA) subfamily
    Nucleotide Protein
    Heading Accession and Version

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