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    SCEL sciellin [ Rana temporaria (common frog) ]

    Gene ID: 120929701, updated on 21-Mar-2024

    Summary

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    Gene symbol
    SCEL
    Gene description
    sciellin
    See related
    EnsemblRapid:ENSRTEG00010016662
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rana temporaria
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
    Orthologs
    human mouse all
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    Genomic context

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    See SCEL in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    31
    Annotation release Status Assembly Chr Location
    100 current aRanTem1.1 (GCF_905171775.1) 2 NC_053490.1 (171043556..171173429)

    Chromosome 2 - NC_053490.1Genomic Context describing neighboring genes Neighboring gene MYC binding protein 2 Neighboring gene E3 ubiquitin-protein ligase MYCBP2-like Neighboring gene E3 SUMO-protein ligase ZBED1-like Neighboring gene SLAIN motif family member 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_053490.1 Chromosome 2 Reference aRanTem1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in epidermis development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sciellin

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference aRanTem1.1

    Genomic

    1. NC_053490.1 Reference aRanTem1.1

      Range
      171043556..171173429
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040341415.1 → XP_040197349.1  sciellin isoform X10

      Related
      ENSRTEP00010021359.1, ENSRTET00010028509.1
      Conserved Domains (1) summary
      smart00132
      Location:626 → 683
      LIM; Zinc-binding domain present in Lin-11, Isl-1, Mec-3

    2. XM_040341414.1 → XP_040197348.1  sciellin isoform X9

      Related
      ENSRTEP00010021334.1, ENSRTET00010028467.1
      Conserved Domains (1) summary
      smart00132
      Location:628 → 685
      LIM; Zinc-binding domain present in Lin-11, Isl-1, Mec-3

    3. XM_040341406.1 → XP_040197340.1  sciellin isoform X1

      Related
      ENSRTEP00010021371.1, ENSRTET00010028530.1
      Conserved Domains (1) summary
      smart00132
      Location:650 → 707
      LIM; Zinc-binding domain present in Lin-11, Isl-1, Mec-3

    4. XM_040341407.1 → XP_040197341.1  sciellin isoform X2

      Conserved Domains (1) summary
      smart00132
      Location:633 → 690
      LIM; Zinc-binding domain present in Lin-11, Isl-1, Mec-3

    5. XM_040341410.1 → XP_040197344.1  sciellin isoform X5

      Related
      ENSRTEP00010021295.1, ENSRTET00010028408.1
      Conserved Domains (1) summary
      smart00132
      Location:629 → 686
      LIM; Zinc-binding domain present in Lin-11, Isl-1, Mec-3

    6. XM_040341416.1 → XP_040197350.1  sciellin isoform X11

      Conserved Domains (1) summary
      smart00132
      Location:612 → 669
      LIM; Zinc-binding domain present in Lin-11, Isl-1, Mec-3

    7. XM_040341411.1 → XP_040197345.1  sciellin isoform X6

      Related
      ENSRTEP00010021381.1, ENSRTET00010028544.1
      Conserved Domains (1) summary
      smart00132
      Location:629 → 686
      LIM; Zinc-binding domain present in Lin-11, Isl-1, Mec-3

    8. XM_040341419.1 → XP_040197353.1  sciellin isoform X13

      Related
      ENSRTEP00010021227.1, ENSRTET00010028299.1
      Conserved Domains (1) summary
      smart00132
      Location:608 → 665
      LIM; Zinc-binding domain present in Lin-11, Isl-1, Mec-3

    9. XM_040341412.1 → XP_040197346.1  sciellin isoform X7

      Related
      ENSRTEP00010021251.1, ENSRTET00010028337.1
      Conserved Domains (1) summary
      smart00132
      Location:629 → 686
      LIM; Zinc-binding domain present in Lin-11, Isl-1, Mec-3

    10. XM_040341413.1 → XP_040197347.1  sciellin isoform X8

      Conserved Domains (1) summary
      smart00132
      Location:629 → 686
      LIM; Zinc-binding domain present in Lin-11, Isl-1, Mec-3

    11. XM_040341420.1 → XP_040197354.1  sciellin isoform X14

      Conserved Domains (1) summary
      smart00132
      Location:566 → 623
      LIM; Zinc-binding domain present in Lin-11, Isl-1, Mec-3

    12. XM_040341408.1 → XP_040197342.1  sciellin isoform X3

      Related
      ENSRTEP00010021341.1, ENSRTET00010028479.1
      Conserved Domains (1) summary
      smart00132
      Location:630 → 687
      LIM; Zinc-binding domain present in Lin-11, Isl-1, Mec-3

    13. XM_040341409.1 → XP_040197343.1  sciellin isoform X4

      Related
      ENSRTEP00010021268.1, ENSRTET00010028364.1
      Conserved Domains (1) summary
      smart00132
      Location:630 → 687
      LIM; Zinc-binding domain present in Lin-11, Isl-1, Mec-3

    14. XM_040341417.1 → XP_040197351.1  sciellin isoform X12

      Conserved Domains (1) summary
      smart00132
      Location:610 → 667
      LIM; Zinc-binding domain present in Lin-11, Isl-1, Mec-3
    Nucleotide Protein
    Heading Accession and Version

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