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    LOC121062395 nuclear factor 1 B-type [ Cygnus olor (mute swan) ]

    Gene ID: 121062395, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC121062395
    Gene description
    nuclear factor 1 B-type
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cygnus olor
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus
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    Genomic context

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    See LOC121062395 in Genome Data Viewer
    Location:
    chromosome: Z
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current bCygOlo1.pri.v2 (GCF_009769625.2) Z NC_049198.1 (33490085..33531055, complement)

    Chromosome Z - NC_049198.1Genomic Context describing neighboring genes Neighboring gene sperm-associated antigen 4 protein-like Neighboring gene sperm-associated antigen 4 protein-like Neighboring gene multiple PDZ domain crumbs cell polarity complex component Neighboring gene nuclear factor 1 B-type

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_049198.1 Chromosome Z Reference bCygOlo1.pri.v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear factor 1 B-type

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cygnus olor Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bCygOlo1.pri.v2 Primary Assembly

    Genomic

    1. NC_049198.1 Reference bCygOlo1.pri.v2 Primary Assembly

      Range
      33490085..33531055 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040542403.1 → XP_040398337.1  nuclear factor 1 B-type

    Nucleotide Protein
    Heading Accession and Version

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