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    TRMT5 tRNA methyltransferase 5 [ Gallus gallus (chicken) ]

    Gene ID: 423520, updated on 3-Dec-2024

    Summary

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    Symbol
    TRMT5provided by CGNC
    Full Name
    tRNA methyltransferase 5provided by CGNC
    Primary source
    CGNC:9026
    See related
    Ensembl:ENSGALG00010017850
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See TRMT5 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (53762146..53767579)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (53750318..53755745)

    Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene protein kinase C eta Neighboring gene solute carrier family 38 member 6 Neighboring gene MNAT1, CDK activating kinase assembly factor Neighboring gene uncharacterized LOC121111016 Neighboring gene SIX homeobox 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in mitochondrial tRNA methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tRNA N1-guanine methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrial matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tRNA (guanine(37)-N1)-methyltransferase
    Names
    TRM5 tRNA methyltransferase 5 homolog
    tRNA methyltransferase 5 homolog
    XP_004936502.2
    XP_025007000.2
    XP_040529723.1
    XP_040529725.1
    XP_040529726.1
    XP_046775404.1
    XP_046798409.1
    XP_046798410.1
    XP_421419.4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      53762146..53767579
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046942453.1 → XP_046798409.1  tRNA (guanine(37)-N1)-methyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z520

    2. XM_421419.7 → XP_421419.4  tRNA (guanine(37)-N1)-methyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z520
      Conserved Domains (1) summary
      COG2520
      Location:188 → 483
      Trm5; tRNA G37 N-methylase Trm5 [Translation, ribosomal structure and biogenesis]

    3. XM_046942454.1 → XP_046798410.1  tRNA (guanine(37)-N1)-methyltransferase isoform X2

      UniProtKB/TrEMBL
      A0A8V0Z520, A0A8V0ZAW4
      Related
      ENSGALP00010025624.1, ENSGALT00010043146.1

    4. XM_004936445.5 → XP_004936502.2  tRNA (guanine(37)-N1)-methyltransferase isoform X3

      UniProtKB/TrEMBL
      A0A8V0Z3Y0, A0A8V0Z520
      Related
      ENSGALP00010025627.1, ENSGALT00010043150.1
      Conserved Domains (1) summary
      COG2520
      Location:170 → 465
      Trm5; tRNA G37 N-methylase Trm5 [Translation, ribosomal structure and biogenesis]

    5. XM_025151232.3 → XP_025007000.2  tRNA (guanine(37)-N1)-methyltransferase isoform X4

      UniProtKB/TrEMBL
      A0A8V0Z520
      Conserved Domains (1) summary
      COG2520
      Location:170 → 465
      Trm5; tRNA G37 N-methylase Trm5 [Translation, ribosomal structure and biogenesis]

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      53750318..53755745
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040673789.2 → XP_040529723.1  tRNA (guanine(37)-N1)-methyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z520
      Conserved Domains (1) summary
      COG2520
      Location:188 → 483
      Trm5; tRNA G37 N-methylase Trm5 [Translation, ribosomal structure and biogenesis]

    2. XM_046919448.1 → XP_046775404.1  tRNA (guanine(37)-N1)-methyltransferase isoform X2

      UniProtKB/TrEMBL
      A0A8V0Z520

    3. XM_040673791.2 → XP_040529725.1  tRNA (guanine(37)-N1)-methyltransferase isoform X3

      UniProtKB/TrEMBL
      A0A8V0Z520
      Conserved Domains (1) summary
      COG2520
      Location:170 → 465
      Trm5; tRNA G37 N-methylase Trm5 [Translation, ribosomal structure and biogenesis]

    4. XM_040673792.2 → XP_040529726.1  tRNA (guanine(37)-N1)-methyltransferase isoform X4

      UniProtKB/TrEMBL
      A0A8V0Z520
      Conserved Domains (1) summary
      COG2520
      Location:170 → 465
      Trm5; tRNA G37 N-methylase Trm5 [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein Strain
    Heading Accession and Version

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