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    Trpc3 transient receptor potential cation channel subfamily C member 3 [ Microtus oregoni (creeping vole) ]

    Gene ID: 121453061, updated on 22-Mar-2024

    Summary

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    Gene symbol
    Trpc3
    Gene description
    transient receptor potential cation channel subfamily C member 3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Microtus oregoni
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
    Orthologs
    human mouse all
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    Genomic context

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    See Trpc3 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    100 current Mior012 (GCF_018167655.1) Unplaced Scaffold NW_024543069.1 (37037317..37105801)

    NW_024543069.1Genomic Context describing neighboring genes Neighboring gene bridge-like lipid transfer protein family member 1 Neighboring gene uncharacterized LOC121452720 Neighboring gene Bardet-Biedl syndrome 7 Neighboring gene cyclin A2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024543069 Unplaced Scaffold Reference Mior012

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables inositol 1,4,5 trisphosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables store-operated calcium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in manganese ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cytosolic calcium ion concentration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cation channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    short transient receptor potential channel 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Microtus oregoni Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mior012

    Genomic

    1. NW_024543069.1 Reference Mior012

      Range
      37037317..37105801
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041659583.1 → XP_041515517.1  short transient receptor potential channel 3 isoform X2

      Conserved Domains (2) summary
      TIGR00870
      Location:85 → 851
      trp; transient-receptor-potential calcium channel protein
      sd00045
      Location:135 → 166
      ANK; ANK repeat [structural motif]

    2. XM_041659582.1 → XP_041515516.1  short transient receptor potential channel 3 isoform X1

      Conserved Domains (2) summary
      TIGR00870
      Location:85 → 879
      trp; transient-receptor-potential calcium channel protein
      sd00045
      Location:135 → 166
      ANK; ANK repeat [structural motif]

    RNA

    1. XR_005974944.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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