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    BOC BOC cell adhesion associated, oncogene regulated [ Vulpes lagopus (Arctic fox) ]

    Gene ID: 121492081, updated on 22-Mar-2024

    Summary

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    Gene symbol
    BOC
    Gene description
    BOC cell adhesion associated, oncogene regulated
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vulpes lagopus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
    Orthologs
    human mouse all
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    Genomic context

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    See BOC in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    100 current ASM1834538v1 (GCF_018345385.1) 1 NC_054824.1 (86908531..86982112, complement)

    Chromosome 1 - NC_054824.1Genomic Context describing neighboring genes Neighboring gene spindle and centriole associated protein 1 Neighboring gene cilia and flagella associated protein 44 Neighboring gene uncharacterized LOC121501516 Neighboring gene nucleolus and neural progenitor protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_054824.1 Chromosome 1 Reference ASM1834538v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axon IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    brother of CDO

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1834538v1 Primary Assembly

    Genomic

    1. NC_054824.1 Reference ASM1834538v1 Primary Assembly

      Range
      86908531..86982112 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041757414.1 → XP_041613348.1  brother of CDO isoform X1

      Conserved Domains (5) summary
      smart00408
      Location:337 → 398
      IGc2; Immunoglobulin C-2 Type
      smart00060
      Location:486 → 559
      FN3; Fibronectin type 3 domain
      smart00410
      Location:137 → 212
      IG_like; Immunoglobulin like
      cd00063
      Location:607 → 698
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd00096
      Location:340 → 344
      Ig; Ig strand B [structural motif]

    2. XM_041757389.1 → XP_041613323.1  brother of CDO isoform X1

      Conserved Domains (5) summary
      smart00408
      Location:337 → 398
      IGc2; Immunoglobulin C-2 Type
      smart00060
      Location:486 → 559
      FN3; Fibronectin type 3 domain
      smart00410
      Location:137 → 212
      IG_like; Immunoglobulin like
      cd00063
      Location:607 → 698
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd00096
      Location:340 → 344
      Ig; Ig strand B [structural motif]

    3. XM_041757408.1 → XP_041613342.1  brother of CDO isoform X1

      Conserved Domains (5) summary
      smart00408
      Location:337 → 398
      IGc2; Immunoglobulin C-2 Type
      smart00060
      Location:486 → 559
      FN3; Fibronectin type 3 domain
      smart00410
      Location:137 → 212
      IG_like; Immunoglobulin like
      cd00063
      Location:607 → 698
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd00096
      Location:340 → 344
      Ig; Ig strand B [structural motif]

    4. XM_041757380.1 → XP_041613314.1  brother of CDO isoform X1

      Conserved Domains (5) summary
      smart00408
      Location:337 → 398
      IGc2; Immunoglobulin C-2 Type
      smart00060
      Location:486 → 559
      FN3; Fibronectin type 3 domain
      smart00410
      Location:137 → 212
      IG_like; Immunoglobulin like
      cd00063
      Location:607 → 698
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd00096
      Location:340 → 344
      Ig; Ig strand B [structural motif]

    5. XM_041757399.1 → XP_041613333.1  brother of CDO isoform X1

      Conserved Domains (5) summary
      smart00408
      Location:337 → 398
      IGc2; Immunoglobulin C-2 Type
      smart00060
      Location:486 → 559
      FN3; Fibronectin type 3 domain
      smart00410
      Location:137 → 212
      IG_like; Immunoglobulin like
      cd00063
      Location:607 → 698
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd00096
      Location:340 → 344
      Ig; Ig strand B [structural motif]

    6. XM_041757362.1 → XP_041613296.1  brother of CDO isoform X2

      Conserved Domains (5) summary
      smart00408
      Location:337 → 398
      IGc2; Immunoglobulin C-2 Type
      smart00060
      Location:486 → 558
      FN3; Fibronectin type 3 domain
      smart00410
      Location:137 → 212
      IG_like; Immunoglobulin like
      cd00063
      Location:606 → 697
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd00096
      Location:340 → 344
      Ig; Ig strand B [structural motif]

    7. XM_041757370.1 → XP_041613304.1  brother of CDO isoform X3

      Conserved Domains (5) summary
      smart00408
      Location:337 → 398
      IGc2; Immunoglobulin C-2 Type
      smart00060
      Location:486 → 559
      FN3; Fibronectin type 3 domain
      smart00410
      Location:137 → 212
      IG_like; Immunoglobulin like
      cd00063
      Location:607 → 698
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd00096
      Location:340 → 344
      Ig; Ig strand B [structural motif]

    8. XM_041757355.1 → XP_041613289.1  brother of CDO isoform X1

      Conserved Domains (5) summary
      smart00408
      Location:337 → 398
      IGc2; Immunoglobulin C-2 Type
      smart00060
      Location:486 → 559
      FN3; Fibronectin type 3 domain
      smart00410
      Location:137 → 212
      IG_like; Immunoglobulin like
      cd00063
      Location:607 → 698
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd00096
      Location:340 → 344
      Ig; Ig strand B [structural motif]
    Nucleotide Protein Strain
    Heading Accession and Version

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