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    zfyve1 zinc finger, FYVE domain containing 1 [ Melanotaenia boesemani (Boeseman's rainbowfish) ]

    Gene ID: 121633349, updated on 22-Mar-2024

    Summary

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    Gene symbol
    zfyve1
    Gene description
    zinc finger, FYVE domain containing 1
    See related
    EnsemblRapid:ENSMBOG00000007293
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Melanotaenia boesemani
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Atheriniformes; Melanotaeniidae; Melanotaenia
    Orthologs
    human zebrafish all
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    Genomic context

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    See zfyve1 in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    100 current fMelBoe1.pri (GCF_017639745.1) 22 NC_055703.1 (11575417..11584051)

    Chromosome 22 - NC_055703.1Genomic Context describing neighboring genes Neighboring gene VPS18 core subunit of CORVET and HOPS complexes Neighboring gene ras homolog family member V Neighboring gene phosphatidylinositol glycan anchor biosynthesis, class H Neighboring gene WD repeat domain 21 Neighboring gene double PHD fingers 3 Neighboring gene uncharacterized LOC121634068 Neighboring gene liver-enriched gene 1, tandem duplicate 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_055703.1 Chromosome 22 Reference fMelBoe1.pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger FYVE domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Melanotaenia boesemani Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fMelBoe1.pri Primary Assembly

    Genomic

    1. NC_055703.1 Reference fMelBoe1.pri Primary Assembly

      Range
      11575417..11584051
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041975262.1 → XP_041831196.1  zinc finger FYVE domain-containing protein 1 isoform X1

      Conserved Domains (5) summary
      cd01851
      Location:173 → 409
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:710 → 769
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl28890
      Location:593 → 654
      FYVE_like_SF; FYVE domain like superfamily
      cd19819
      Location:16 → 63
      Bbox1_ZFYVE1_rpt1; first B-box-type 1 zinc finger found in zinc finger FYVE domain-containing protein 1 (ZFYVE1) and similar proteins
      cl00034
      Location:69 → 120
      Bbox_SF; B-box-type zinc finger superfamily

    2. XM_041975263.1 → XP_041831197.1  zinc finger FYVE domain-containing protein 1 isoform X1

      Related
      ENSMBOP00000015121.1, ENSMBOT00000015471.1
      Conserved Domains (5) summary
      cd01851
      Location:173 → 409
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:710 → 769
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl28890
      Location:593 → 654
      FYVE_like_SF; FYVE domain like superfamily
      cd19819
      Location:16 → 63
      Bbox1_ZFYVE1_rpt1; first B-box-type 1 zinc finger found in zinc finger FYVE domain-containing protein 1 (ZFYVE1) and similar proteins
      cl00034
      Location:69 → 120
      Bbox_SF; B-box-type zinc finger superfamily

    3. XM_041975265.1 → XP_041831199.1  zinc finger FYVE domain-containing protein 1 isoform X2

      Conserved Domains (3) summary
      cd01851
      Location:72 → 308
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:609 → 668
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl00034
      Location:2 → 19
      Bbox_SF; B-box-type zinc finger superfamily

    4. XM_041975259.1 → XP_041831193.1  zinc finger FYVE domain-containing protein 1 isoform X1

      Conserved Domains (5) summary
      cd01851
      Location:173 → 409
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:710 → 769
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl28890
      Location:593 → 654
      FYVE_like_SF; FYVE domain like superfamily
      cd19819
      Location:16 → 63
      Bbox1_ZFYVE1_rpt1; first B-box-type 1 zinc finger found in zinc finger FYVE domain-containing protein 1 (ZFYVE1) and similar proteins
      cl00034
      Location:69 → 120
      Bbox_SF; B-box-type zinc finger superfamily

    5. XM_041975261.1 → XP_041831195.1  zinc finger FYVE domain-containing protein 1 isoform X1

      Related
      ENSMBOP00000015111.1, ENSMBOT00000015461.1
      Conserved Domains (5) summary
      cd01851
      Location:173 → 409
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:710 → 769
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl28890
      Location:593 → 654
      FYVE_like_SF; FYVE domain like superfamily
      cd19819
      Location:16 → 63
      Bbox1_ZFYVE1_rpt1; first B-box-type 1 zinc finger found in zinc finger FYVE domain-containing protein 1 (ZFYVE1) and similar proteins
      cl00034
      Location:69 → 120
      Bbox_SF; B-box-type zinc finger superfamily

    6. XM_041975260.1 → XP_041831194.1  zinc finger FYVE domain-containing protein 1 isoform X1

      Conserved Domains (5) summary
      cd01851
      Location:173 → 409
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:710 → 769
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl28890
      Location:593 → 654
      FYVE_like_SF; FYVE domain like superfamily
      cd19819
      Location:16 → 63
      Bbox1_ZFYVE1_rpt1; first B-box-type 1 zinc finger found in zinc finger FYVE domain-containing protein 1 (ZFYVE1) and similar proteins
      cl00034
      Location:69 → 120
      Bbox_SF; B-box-type zinc finger superfamily

    7. XM_041975266.1 → XP_041831200.1  zinc finger FYVE domain-containing protein 1 isoform X3

      Conserved Domains (3) summary
      cd01851
      Location:37 → 273
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:574 → 633
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl28890
      Location:457 → 518
      FYVE_like_SF; FYVE domain like superfamily
    Nucleotide Protein
    Heading Accession and Version

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