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    NR6A1 nuclear receptor subfamily 6 group A member 1 [ Ovis aries (sheep) ]

    Gene ID: 100302637, updated on 10-Oct-2024

    Summary

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    Gene symbol
    NR6A1
    Gene description
    nuclear receptor subfamily 6 group A member 1
    See related
    EnsemblRapid:ENSOARG00020008843
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ovis aries
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
    Orthologs
    human mouse all
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    Genomic context

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    See NR6A1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 3 NC_056056.1 (11117358..11335420)

    Chromosome 3 - NC_056056.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene olfactomedin like 2A Neighboring gene large ribosomal subunit protein eL6-like Neighboring gene uncharacterized LOC105611269 Neighboring gene microRNA mir-181a-2 Neighboring gene nuclear receptor subfamily 5 group A member 1 Neighboring gene uncharacterized LOC132659554 Neighboring gene adhesion G protein-coupled receptor D2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056056.1 Chromosome 3 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Association analysis of polymorphism in the NR6A1 gene with the lumbar vertebrae number traits in sheep. Zhang X, et al. Genes Genomics, 2019 Oct. PMID 31302865
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear receptor subfamily 6 group A member 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Genomic

    1. NC_056056.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

      Range
      11117358..11335420
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042245711.1 → XP_042101645.1  nuclear receptor subfamily 6 group A member 1 isoform X1

      UniProtKB/TrEMBL
      W5PV47
      Related
      ENSOARP00020011516.1, ENSOART00020013963.2
      Conserved Domains (2) summary
      cd06953
      Location:256 → 467
      NR_LBD_DHR4_like; The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4
      cd07169
      Location:52 → 141
      NR_DBD_GCNF_like; DNA-binding domain of Germ cell nuclear factor (GCNF) F1 is composed of two C4-type zinc fingers

    2. XM_060413797.1 → XP_060269780.1  nuclear receptor subfamily 6 group A member 1 isoform X9

    3. XM_042245712.1 → XP_042101646.1  nuclear receptor subfamily 6 group A member 1 isoform X2

      UniProtKB/TrEMBL
      W5PV47
      Conserved Domains (2) summary
      cd06953
      Location:255 → 466
      NR_LBD_DHR4_like; The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4
      cd07169
      Location:52 → 141
      NR_DBD_GCNF_like; DNA-binding domain of Germ cell nuclear factor (GCNF) F1 is composed of two C4-type zinc fingers

    4. XM_060413798.1 → XP_060269781.1  nuclear receptor subfamily 6 group A member 1 isoform X10

    5. XM_060413792.1 → XP_060269775.1  nuclear receptor subfamily 6 group A member 1 isoform X3

    6. XM_060413793.1 → XP_060269776.1  nuclear receptor subfamily 6 group A member 1 isoform X4

    7. XM_042245713.2 → XP_042101647.1  nuclear receptor subfamily 6 group A member 1 isoform X5

      UniProtKB/TrEMBL
      W5PV47
      Related
      ENSOARP00020049047.1, ENSOART00020049550.1
      Conserved Domains (2) summary
      cd06953
      Location:214 → 425
      NR_LBD_DHR4_like; The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4
      cd07169
      Location:10 → 99
      NR_DBD_GCNF_like; DNA-binding domain of Germ cell nuclear factor (GCNF) F1 is composed of two C4-type zinc fingers

    8. XM_060413794.1 → XP_060269777.1  nuclear receptor subfamily 6 group A member 1 isoform X6

    9. XM_060413795.1 → XP_060269778.1  nuclear receptor subfamily 6 group A member 1 isoform X7

    10. XM_060413796.1 → XP_060269779.1  nuclear receptor subfamily 6 group A member 1 isoform X8

    Nucleotide Protein Strain
    Heading Accession and Version

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