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    tpgs1 tubulin polyglutamylase complex subunit 1 [ Callorhinchus milii (elephant shark) ]

    Gene ID: 103182045, updated on 11-Mar-2024

    Summary

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    Gene symbol
    tpgs1
    Gene description
    tubulin polyglutamylase complex subunit 1
    See related
    Ensembl:ENSCMIG00000006107
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Callorhinchus milii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
    Orthologs
    human zebrafish all
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    Genomic context

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    See tpgs1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704762.1 (9120151..9122799)
    100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890117.1 (3389796..3393039)

    NW_024704762.1Genomic Context describing neighboring genes Neighboring gene SHC (Src homology 2 domain containing) transforming protein 2 Neighboring gene normal mucosa of esophagus-specific gene 1 protein Neighboring gene ubiquitin-conjugating enzyme E2 R2 Neighboring gene SIN3 transcription regulator family member B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein polyglutamylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tubulin polyglutamylase complex subunit 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IMCB_Cmil_1.0 Primary Assembly

    Genomic

    1. NW_024704762.1 Reference IMCB_Cmil_1.0 Primary Assembly

      Range
      9120151..9122799
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007898896.2 → XP_007897087.2  tubulin polyglutamylase complex subunit 1

      UniProtKB/TrEMBL
      V9KZM2
      Conserved Domains (1) summary
      cl02594
      Location:18 → 49
      DD_R_PKA; Dimerization/Docking domain of the Regulatory subunit of cAMP-dependent protein kinase and similar domains
    Nucleotide Protein
    Heading Accession and Version

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